RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 CRELD1Q96HD1 420 aa8.38□□□□□ -1.07
RNU4-40P-201ENST00000364351 PARD6AQ9NPB6 346 aa8.38□□□□□ -1.07
RNU4-40P-201ENST00000364351 SSU72P8A0A1W2PR75 194 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 OR14I1A6ND48 311 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 NOTOA8MTQ0 251 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 SORBS3O60504 671 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 USP2O75604 605 aaPredicted RBP8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 PWP1Q13610 501 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 SLC14A2Q15849 920 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 RNF111Q6ZNA4 994 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 REC114Q7Z4M0 266 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 ENOX1Q8TC92 643 aaKnown RBP8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 SYTL5Q8TDW5 730 aaPredicted RBP8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 FOXP3Q9BZS1 431 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 ZNF281Q9Y2X9 895 aa8.37□□□□□ -1.07
RNU4-40P-201ENST00000364351 RGS13O14921 159 aa8.36□□□□□ -1.07
RNU4-40P-201ENST00000364351 TLR3O15455 904 aaKnown RBP8.36□□□□□ -1.07
RNU4-40P-201ENST00000364351 TCERG1LQ5VWI1 586 aa8.36□□□□□ -1.07
RNU4-40P-201ENST00000364351 NLRX1Q86UT6 975 aa8.36□□□□□ -1.07
RNU4-40P-201ENST00000364351 HDAC8Q9BY41 377 aa8.36□□□□□ -1.07
RNU4-40P-201ENST00000364351 MRS2Q9HD23 443 aa8.36□□□□□ -1.07
RNU4-40P-201ENST00000364351 VTI1BQ9UEU0 232 aa8.36□□□□□ -1.07
RNU4-40P-201ENST00000364351 RFXAPO00287 272 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 EFEMP2O95967 443 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 SRSF3P84103 164 aaKnown RBP8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 MLECQ14165 292 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 SSPNQ14714 243 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 ARSHQ5FYA8 562 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 LCE5AQ5TCM9 118 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 DAGLBQ8NCG7 672 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 RELTQ969Z4 430 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 TCTN2Q96GX1 697 aa8.35□□□□□ -1.07
RNU4-40P-201ENST00000364351 SLC22A31A6NKX4 558 aa8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 UBOX5O94941 541 aa8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 RAG1P15918 1043 aa8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 PCBP3P57721 371 aaKnown RBP8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 RNF4P78317 190 aa8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 CEP128Q6ZU80 1094 aa8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 TMC3Q7Z5M5 1100 aa8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 SIRT5Q9NXA8 310 aa8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 TCFL5Q9UL49 500 aa8.34□□□□□ -1.07
RNU4-40P-201ENST00000364351 FKTNO75072 461 aa8.33□□□□□ -1.08
RNU4-40P-201ENST00000364351 GARTP22102 1010 aa8.33□□□□□ -1.08
RNU4-40P-201ENST00000364351 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
RNU4-40P-201ENST00000364351 FAM196AQ6ZSG2 479 aa8.33□□□□□ -1.08
RNU4-40P-201ENST00000364351 AEBP1Q8IUX7 1158 aa8.33□□□□□ -1.08
RNU4-40P-201ENST00000364351 MAP6Q96JE9 813 aa8.33□□□□□ -1.08
RNU4-40P-201ENST00000364351 NRDCO43847 1150 aa8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 PI3P19957 117 aa8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 SDHBP21912 280 aa8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 KIR2DL1P43626 348 aaPredicted RBP8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 KIR2DL2P43627 348 aaPredicted RBP8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 TAGLNQ01995 201 aaKnown RBP8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 SNW1Q13573 536 aaKnown RBP8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 CWF19L2Q2TBE0 894 aaKnown RBP8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 ZPBP2Q6X784 338 aa8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 FBXO33Q7Z6M2 555 aa8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 ZNF655Q8N720 491 aaPredicted RBP8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 PANK1Q8TE04 598 aa8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 BRMS1Q9HCU9 246 aa8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 MBD1Q9UIS9 605 aaPredicted RBP8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 PCDHB14Q9Y5E9 798 aa8.32□□□□□ -1.08
RNU4-40P-201ENST00000364351 SYPP08247 313 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 NBPF9Q3BBW0 867 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 NBPF12Q5TAG4 269 aaPredicted RBP8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 TMEM151BQ8IW70 566 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 MARCH10Q8NA82 808 aaPredicted RBP8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 LINC00116Q8NCU8 138 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 HHIPL1Q96JK4 782 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 KCNC2Q96PR1 638 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 CRTAC1Q9NQ79 661 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 KBTBD4Q9NVX7 518 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 IRAK3Q9Y616 596 aa8.31□□□□□ -1.08
RNU4-40P-201ENST00000364351 TMEM82A0PJX8 343 aa8.3□□□□□ -1.08
RNU4-40P-201ENST00000364351 FBXL19Q6PCT2 694 aa8.3□□□□□ -1.08
RNU4-40P-201ENST00000364351 SIGLEC10Q96LC7 697 aa8.3□□□□□ -1.08
RNU4-40P-201ENST00000364351 A0A0G2JLL6 359 aaPredicted RBP8.29□□□□□ -1.08
RNU4-40P-201ENST00000364351 TRIM13O60858 407 aa8.29□□□□□ -1.08
RNU4-40P-201ENST00000364351 POLR2BP30876 1174 aaKnown RBP8.29□□□□□ -1.08
RNU4-40P-201ENST00000364351 VIPR1P32241 457 aa8.29□□□□□ -1.08
RNU4-40P-201ENST00000364351 EPHB3P54753 998 aa8.29□□□□□ -1.08
RNU4-40P-201ENST00000364351 COPRSQ9NQ92 184 aa8.29□□□□□ -1.08
RNU4-40P-201ENST00000364351 GMIPQ9P107 970 aa8.29□□□□□ -1.08
RNU4-40P-201ENST00000364351 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
RNU4-40P-201ENST00000364351 FOXD2O60548 495 aaPredicted RBP8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 PRAMEF1O95521 474 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 PNLIPP16233 465 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 RTP1P59025 263 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 BBS9Q3SYG4 887 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 ZNF512BQ96KM6 892 aaPredicted RBP8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 PLCD4Q9BRC7 762 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 KRTAP9-3Q9BYQ3 159 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 PRDM14Q9GZV8 571 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 CNTD2Q9H8S5 307 aa8.28□□□□□ -1.08
RNU4-40P-201ENST00000364351 ROBO2Q9HCK4 1378 aa8.27□□□□□ -1.09
RNU4-40P-201ENST00000364351 HRKO00198 91 aa8.27□□□□□ -1.09
RNU4-40P-201ENST00000364351 OVOS1Q6IE37 1185 aa8.27□□□□□ -1.09
RNU4-40P-201ENST00000364351 SUPT16HQ9Y5B9 1047 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms