RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TAF7LQ5H9L4 462 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 ZNF227Q86WZ6 799 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 KISS1RQ969F8 398 aaPredicted RBP5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 COX4I2Q96KJ9 171 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 MRGPRX3Q96LB0 322 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 FGD4Q96M96 766 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 SPC25Q9HBM1 224 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 LGR6Q9HBX8 967 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 CWC22Q9HCG8 908 aaKnown RBP5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 GP6Q9HCN6 339 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 IFT57Q9NWB7 429 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 PRR13Q9NZ81 148 aa5.4□□□□□ -1.54
RNU6-28P-201ENST00000362378 TRAV20A0A0B4J274 112 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 RFPL3O75679 317 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 PPM1BO75688 479 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 CYP7A1P22680 504 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 RXRBP28702 533 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 PPP2R2AP63151 447 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 CDK5R2Q13319 367 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 DALRD3Q5D0E6 543 aaKnown RBP5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 FOXB2Q5VYV0 432 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 PAOXQ6QHF9 649 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 FAM214BQ7L5A3 538 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 FILIP1Q7Z7B0 1213 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 CLEC10AQ8IUN9 316 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 ARHGEF39Q8N4T4 335 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 LRRN4CLQ8ND94 238 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 BVESQ8NE79 360 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 ZCRB1Q8TBF4 217 aaKnown RBP5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 EXOC2Q96KP1 924 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 AARSD1Q9BTE6 412 aaKnown RBP5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 DHRS4Q9BTZ2 278 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 DUSP23Q9BVJ7 150 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 SSBP4Q9BWG4 385 aaPredicted RBP5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 LRP2BPQ9P2M1 347 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 PLAAQ9Y263 795 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 EMC9Q9Y3B6 208 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 PCDHB12Q9Y5F1 795 aa5.39□□□□□ -1.55
RNU6-28P-201ENST00000362378 FGFR1P11362 822 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 ITGA4P13612 1032 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 ZNF445P59923 1031 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 ADAT2Q7Z6V5 191 aaKnown RBP5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 SCUBE1Q8IWY4 988 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 TOP6BLQ8N6T0 577 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 GIMAP7Q8NHV1 300 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 SYTL5Q8TDW5 730 aaPredicted RBP5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 FAM83CQ9BQN1 747 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 DIS3Q9Y2L1 958 aaKnown RBP5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 CD2APQ9Y5K6 639 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 FHOD1Q9Y613 1164 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 CNTNAP4Q9C0A0 1308 aa5.38□□□□□ -1.55
RNU6-28P-201ENST00000362378 DNAJC25-GNG10A0A024R161 153 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 TRBV23-1A0A0A0MS06 115 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 NOP56O00567 594 aaKnown RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 PLD2O14939 933 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 DHX15O43143 795 aaKnown RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 VIL1P09327 827 aaKnown RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 IBSPP21815 317 aaPredicted RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 L1CAMP32004 1257 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 MASP1P48740 699 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 NFKBIBQ15653 356 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 FNDC3BQ53EP0 1204 aaKnown RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 FAM209AQ5JX71 171 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 YOD1Q5VVQ6 348 aaPredicted RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 GPAT2Q6NUI2 795 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 POMZP3Q6PJE2 187 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 BEND4Q6ZU67 534 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 C22orf34Q6ZV56 151 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 TRIM59Q8IWR1 403 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 CRACR2BQ8N4Y2 399 aaPredicted RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 GATA6Q92908 595 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 NINJ1Q92982 152 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 OSBP2Q969R2 916 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 IPO9Q96P70 1041 aaKnown RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 CDC6Q99741 560 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 PRDM14Q9GZV8 571 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 KCNF1Q9H3M0 494 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 FBXL21Q9UKT6 434 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 TPX2Q9ULW0 747 aaKnown RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 AKT3Q9Y243 479 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 NOP58Q9Y2X3 529 aaKnown RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 SUGT1Q9Y2Z0 365 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 MRPS23Q9Y3D9 190 aaKnown RBP5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 COL4A3BPQ9Y5P4 624 aa5.37□□□□□ -1.55
RNU6-28P-201ENST00000362378 RNF225M0QZC1 329 aaPredicted RBP5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 TBX1O43435 398 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 ADAM23O75077 832 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 LRRN2O75325 713 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 LEFTY1O75610 366 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 PABPC1P11940 636 aaKnown RBP5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 KIR3DL1P43629 444 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 SUMO1P63165 101 aaKnown RBP5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 IGBP1P78318 339 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 GRB10Q13322 594 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 TM4SF20Q53R12 229 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 NOL9Q5SY16 702 aaKnown RBP5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 SFRP5Q5T4F7 317 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 OGFOD3Q6PK18 319 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 PPP1R14AQ96A00 147 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 Q96M66 194 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms