RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 EFCAB8A8MWE9 144 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 OR52Z1P0C646 297 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 OAS2P29728 719 aaKnown RBP18.21■□□□□ 0.51
SCAF1-201ENST00000360565 DNM2P50570 870 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 ATG9AQ7Z3C6 839 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 UTP14CQ5TAP6 766 aaKnown RBP18.21■□□□□ 0.51
SCAF1-201ENST00000360565 DPP8Q6V1X1 898 aaPredicted RBP18.21■□□□□ 0.51
SCAF1-201ENST00000360565 CYB5R4Q7L1T6 521 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 NEK8Q86SG6 692 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 FMR1NBQ8N0W7 255 aaPredicted RBP18.21■□□□□ 0.51
SCAF1-201ENST00000360565 IFIH1Q9BYX4 1025 aaKnown RBP18.21■□□□□ 0.51
SCAF1-201ENST00000360565 ATP2C2O75185 946 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 EPB41P11171 864 aaKnown RBP18.21■□□□□ 0.51
SCAF1-201ENST00000360565 MB21D2Q8IYB1 491 aaPredicted RBP18.21■□□□□ 0.51
SCAF1-201ENST00000360565 RGS22Q8NE09 1264 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 FAM76AQ8TAV0 307 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 EPSTI1Q96J88 318 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 NOX5Q96PH1 765 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 SAR1BQ9Y6B6 198 aa18.21■□□□□ 0.51
SCAF1-201ENST00000360565 USP37Q86T82 979 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 EBAG9O00559 213 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 DESP17661 470 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 LONP1P36776 959 aaKnown RBP18.2■□□□□ 0.5
SCAF1-201ENST00000360565 COPB1P53618 953 aaKnown RBP18.2■□□□□ 0.5
SCAF1-201ENST00000360565 SMC1AQ14683 1233 aaKnown RBP18.2■□□□□ 0.5
SCAF1-201ENST00000360565 USH1GQ495M9 461 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 SARM1Q6SZW1 724 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 LRRC47Q8N1G4 583 aaKnown RBP18.2■□□□□ 0.5
SCAF1-201ENST00000360565 ISCA1Q9BUE6 129 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 GLT8D2Q9H1C3 349 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 FRMPD2Q68DX3 1309 aaPredicted RBP18.2■□□□□ 0.5
SCAF1-201ENST00000360565 PRPHP41219 470 aa18.2■□□□□ 0.5
SCAF1-201ENST00000360565 ALDH8A1Q9H2A2 487 aaPredicted RBP18.2■□□□□ 0.5
SCAF1-201ENST00000360565 ENOX1Q8TC92 643 aaKnown RBP18.19■□□□□ 0.5
SCAF1-201ENST00000360565 SPTLC3Q9NUV7 552 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 SRPRBQ9Y5M8 271 aaKnown RBP18.19■□□□□ 0.5
SCAF1-201ENST00000360565 EPN1Q9Y6I3 576 aaPredicted RBP18.19■□□□□ 0.5
SCAF1-201ENST00000360565 TLDC2A0PJX2 215 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 BTDP43251 543 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 SLC39A2Q9NP94 309 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 ZYXQ15942 572 aaKnown RBP18.19■□□□□ 0.5
SCAF1-201ENST00000360565 CCDC144BQ3MJ40 725 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 HOOK3Q86VS8 718 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 CCDC155Q8N6L0 562 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 USP40Q9NVE5 1235 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 DNM3Q9UQ16 869 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 TRAPPC10P48553 1259 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 KLHL30Q0D2K2 578 aa18.19■□□□□ 0.5
SCAF1-201ENST00000360565 RBM26Q5T8P6 1007 aaKnown RBP18.19■□□□□ 0.5
SCAF1-201ENST00000360565 RFX7Q2KHR2 1363 aa18.18■□□□□ 0.5
SCAF1-201ENST00000360565 VWA3BQ502W6 1294 aa18.18■□□□□ 0.5
SCAF1-201ENST00000360565 FRMD4BQ9Y2L6 1034 aa18.18■□□□□ 0.5
SCAF1-201ENST00000360565 NCOA3Q9Y6Q9 1424 aa18.18■□□□□ 0.5
SCAF1-201ENST00000360565 VSTM4Q8IW00 320 aa18.18■□□□□ 0.5
SCAF1-201ENST00000360565 NEDD4P46934 1319 aa18.18■□□□□ 0.5
SCAF1-201ENST00000360565 ASIC2Q16515 512 aa18.18■□□□□ 0.5
SCAF1-201ENST00000360565 SP4Q02446 784 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 PCDHA12Q9UN75 941 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 HAUS4Q9H6D7 363 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 RASAL2Q9UJF2 1139 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 SEMA3EO15041 775 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 CDC27P30260 824 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 EXOSC10Q01780 885 aaKnown RBP18.17■□□□□ 0.5
SCAF1-201ENST00000360565 C10orf67Q8IYJ2 551 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 TCHPQ9BT92 498 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 ZNF609O15014 1411 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 USP17L8P0C7I0 530 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 RBL2Q08999 1139 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 BRD3Q15059 726 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 GALNT17Q6IS24 598 aa18.17■□□□□ 0.5
SCAF1-201ENST00000360565 SMIM23A6NLE4 172 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 PLEKHA8P1O95397 391 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 PTPREP23469 700 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 AFAP1L1Q8TED9 768 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 PLCD4Q9BRC7 762 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 COL3A1P02461 1466 aaPredicted RBP18.16■□□□□ 0.5
SCAF1-201ENST00000360565 PRPF3O43395 683 aaKnown RBP18.16■□□□□ 0.5
SCAF1-201ENST00000360565 CFBP00751 764 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 GJC1P36383 396 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 WHAMMP3Q1A5X7 153 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 SND1Q7KZF4 910 aaKnown RBP eCLIP18.16■□□□□ 0.5
SCAF1-201ENST00000360565 PLA2G4DQ86XP0 818 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 CEMIPQ8WUJ3 1361 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 MYOCDQ8IZQ8 938 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 ARFGAP2Q8N6H7 521 aa18.16■□□□□ 0.5
SCAF1-201ENST00000360565 BBXQ8WY36 941 aaPredicted RBP18.16■□□□□ 0.5
SCAF1-201ENST00000360565 REREQ9P2R6 1566 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 SFMBT2Q5VUG0 894 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 MAEAQ7L5Y9 396 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 SLC35F6Q8N357 371 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 TUBGCP2Q9BSJ2 902 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 SCNN1DP51172 638 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 NT5C3AQ9H0P0 336 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 CLTCQ00610 1675 aaKnown RBP18.15■□□□□ 0.5
SCAF1-201ENST00000360565 TRIM28Q13263 835 aaKnown RBP18.15■□□□□ 0.5
SCAF1-201ENST00000360565 DIXDC1Q155Q3 683 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms