RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 USP26Q9BXU7 913 aa22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 NFXL1Q6ZNB6 911 aa22.47■■□□□ 1.19
HLA-DRB1-201ENST00000360004 MB21D2Q8IYB1 491 aaPredicted RBP22.47■■□□□ 1.19
HLA-DRB1-201ENST00000360004 RASEFQ8IZ41 740 aa22.47■■□□□ 1.19
HLA-DRB1-201ENST00000360004 PNMA1Q8ND90 353 aa22.47■■□□□ 1.19
HLA-DRB1-201ENST00000360004 DCAF4Q8WV16 495 aa22.47■■□□□ 1.19
HLA-DRB1-201ENST00000360004 JAKMIP1Q96N16 626 aaKnown RBP22.47■■□□□ 1.19
HLA-DRB1-201ENST00000360004 HMGB1P09429 215 aaKnown RBP22.46■■□□□ 1.19
HLA-DRB1-201ENST00000360004 PSMA5P28066 241 aa22.46■■□□□ 1.19
HLA-DRB1-201ENST00000360004 NOM1Q5C9Z4 860 aaKnown RBP22.46■■□□□ 1.19
HLA-DRB1-201ENST00000360004 C17orf99Q6UX52 265 aa22.46■■□□□ 1.19
HLA-DRB1-201ENST00000360004 GMCL1Q96IK5 515 aa22.46■■□□□ 1.19
HLA-DRB1-201ENST00000360004 PRDM10Q9NQV6 1147 aa22.46■■□□□ 1.19
HLA-DRB1-201ENST00000360004 FEM1BQ9UK73 627 aa22.46■■□□□ 1.19
HLA-DRB1-201ENST00000360004 SNX14Q9Y5W7 946 aa22.46■■□□□ 1.19
HLA-DRB1-201ENST00000360004 TMEM232C9JQI7 657 aa22.45■■□□□ 1.18
HLA-DRB1-201ENST00000360004 NOVP48745 357 aa22.45■■□□□ 1.18
HLA-DRB1-201ENST00000360004 RCSD1Q6JBY9 416 aa22.45■■□□□ 1.18
HLA-DRB1-201ENST00000360004 CHURC1Q8WUH1 139 aa22.45■■□□□ 1.18
HLA-DRB1-201ENST00000360004 KIFC2Q96AC6 838 aa22.45■■□□□ 1.18
HLA-DRB1-201ENST00000360004 TMEM87BQ96K49 555 aa22.45■■□□□ 1.18
HLA-DRB1-201ENST00000360004 SLF1Q9BQI6 1058 aa22.45■■□□□ 1.18
HLA-DRB1-201ENST00000360004 CCDC69A6NI79 296 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 SPDYE16A6NNV3 312 aaPredicted RBP22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 DSG3P32926 999 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 STAT2P52630 851 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 PLS1Q14651 629 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 FAM110CQ1W6H9 321 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 TSGA10IPQ3SY00 556 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 BLOC1S2Q6QNY1 142 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 KCTD1Q719H9 257 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 GPRC5AQ8NFJ5 357 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 CD99L2Q8TCZ2 262 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 ADGRA2Q96PE1 1338 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 FBXO28Q9NVF7 368 aa22.44■■□□□ 1.18
HLA-DRB1-201ENST00000360004 FRMPD2Q68DX3 1309 aaPredicted RBP22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 MYPNQ86TC9 1320 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 FMNL1O95466 1100 aaPredicted RBP22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 BCRP11274 1271 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 CCNA1P78396 465 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 ADCK5Q3MIX3 580 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 CATIPQ7Z7H3 387 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 FAM160B2Q86V87 743 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 PRPF38AQ8NAV1 312 aaKnown RBP22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 ANKS1AQ92625 1134 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 ATG4CQ96DT6 458 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 UPF2Q9HAU5 1272 aaKnown RBP22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 GPCPD1Q9NPB8 672 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 PPP1R9AQ9ULJ8 1098 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 RABGAP1Q9Y3P9 1069 aa22.43■■□□□ 1.18
HLA-DRB1-201ENST00000360004 PCNTO95613 3336 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 ZBED4O75132 1171 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 CASTP20810 708 aaKnown RBP22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 ANTXR2P58335 489 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 SEC23AQ15436 765 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 C8orf34Q49A92 452 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 WDR78Q5VTH9 848 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 DHX32Q7L7V1 743 aaKnown RBP22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 TMTC2Q8N394 836 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 MB21D1Q8N884 522 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 MTA3Q9BTC8 594 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 LRRC2Q9BYS8 371 aa22.42■■□□□ 1.18
HLA-DRB1-201ENST00000360004 PARP1P09874 1014 aaKnown RBP22.41■■□□□ 1.18
HLA-DRB1-201ENST00000360004 FCGRTP55899 365 aa22.41■■□□□ 1.18
HLA-DRB1-201ENST00000360004 ERVK-9P63128 1117 aa22.41■■□□□ 1.18
HLA-DRB1-201ENST00000360004 ERVK-24P63145 666 aa22.41■■□□□ 1.18
HLA-DRB1-201ENST00000360004 LACTBP83111 547 aaPredicted RBP22.41■■□□□ 1.18
HLA-DRB1-201ENST00000360004 SYNE3Q6ZMZ3 975 aa22.41■■□□□ 1.18
HLA-DRB1-201ENST00000360004 KCNB2Q92953 911 aa22.41■■□□□ 1.18
HLA-DRB1-201ENST00000360004 DHX16O60231 1041 aaKnown RBP22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 PDHBP11177 359 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 PSMC4P43686 418 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 SLC4A3P48751 1232 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 GPATCH4Q5T3I0 446 aaKnown RBP22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 RASGRP2Q7LDG7 609 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 NUP133Q8WUM0 1156 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 TCEANC2Q96MN5 208 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 EFCC1Q9HA90 598 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 RBPJLQ9UBG7 517 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 MORF4L1Q9UBU8 362 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 NAP1L2Q9ULW6 460 aaPredicted RBP22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 TRIM17Q9Y577 477 aa22.4■■□□□ 1.18
HLA-DRB1-201ENST00000360004 WDR19Q8NEZ3 1342 aa22.39■■□□□ 1.18
HLA-DRB1-201ENST00000360004 SH2B2O14492 632 aaPredicted RBP22.39■■□□□ 1.17
HLA-DRB1-201ENST00000360004 TNPO2O14787 897 aaKnown RBP22.39■■□□□ 1.17
HLA-DRB1-201ENST00000360004 HOXD10P28358 340 aa22.39■■□□□ 1.17
HLA-DRB1-201ENST00000360004 ASPRV1Q53RT3 343 aa22.39■■□□□ 1.17
HLA-DRB1-201ENST00000360004 LBX2Q6XYB7 198 aa22.39■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CTU1Q7Z7A3 348 aaKnown RBP22.39■■□□□ 1.17
HLA-DRB1-201ENST00000360004 IGDCC4Q8TDY8 1250 aa22.39■■□□□ 1.17
HLA-DRB1-201ENST00000360004 TXNRD2Q9NNW7 524 aa22.39■■□□□ 1.17
HLA-DRB1-201ENST00000360004 PEX10O60683 326 aa22.38■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SEC24BO95487 1268 aa22.38■■□□□ 1.17
HLA-DRB1-201ENST00000360004 GOLGA8HP0CJ92 632 aa22.38■■□□□ 1.17
HLA-DRB1-201ENST00000360004 ZNF543Q08ER8 600 aa22.38■■□□□ 1.17
HLA-DRB1-201ENST00000360004 COA7Q96BR5 231 aa22.38■■□□□ 1.17
HLA-DRB1-201ENST00000360004 LY9Q9HBG7 655 aa22.38■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SLC12A7Q9Y666 1083 aa22.38■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CYP46A1Q9Y6A2 500 aa22.38■■□□□ 1.17
HLA-DRB1-201ENST00000360004 VWA5AO00534 786 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms