RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SCRN1Q12765 414 aa29.63■■■□□ 2.33
SSBP3-202ENST00000357475 GRM1Q13255 1194 aa29.63■■■□□ 2.33
SSBP3-202ENST00000357475 TREML2Q5T2D2 321 aa29.63■■■□□ 2.33
SSBP3-202ENST00000357475 TTBK2Q6IQ55 1244 aa29.63■■■□□ 2.33
SSBP3-202ENST00000357475 PAXIP1Q6ZW49 1069 aaPredicted RBP29.63■■■□□ 2.33
SSBP3-202ENST00000357475 CMTR1Q8N1G2 835 aaKnown RBP29.63■■■□□ 2.33
SSBP3-202ENST00000357475 HHIPL1Q96JK4 782 aa29.63■■■□□ 2.33
SSBP3-202ENST00000357475 C12orf42Q96LP6 360 aa29.63■■■□□ 2.33
SSBP3-202ENST00000357475 GPCPD1Q9NPB8 672 aa29.63■■■□□ 2.33
SSBP3-202ENST00000357475 NID2Q14112 1375 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 RASSF10A6NK89 507 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 PFKFB2O60825 505 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 SLC1A4P43007 532 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 ZNF543Q08ER8 600 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 SNAPC2Q13487 334 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 CCDC96Q2M329 555 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 GADL1Q6ZQY3 521 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 DCAF4Q8WV16 495 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 ZIC5Q96T25 663 aa29.62■■■□□ 2.33
SSBP3-202ENST00000357475 PALM3A6NDB9 673 aaPredicted RBP29.61■■■□□ 2.33
SSBP3-202ENST00000357475 PLEKHA8P1O95397 391 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 ADD1P35611 737 aaKnown RBP29.61■■■□□ 2.33
SSBP3-202ENST00000357475 RTN1Q16799 776 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 SLC35G1Q2M3R5 365 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 IL27Q8NEV9 243 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 SLKQ9H2G2 1235 aaPredicted RBP29.61■■■□□ 2.33
SSBP3-202ENST00000357475 TMOD4Q9NZQ9 345 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 ISY1Q9ULR0 285 aaKnown RBP29.61■■■□□ 2.33
SSBP3-202ENST00000357475 BAZ2BQ9UIF8 2168 aaKnown RBP29.61■■■□□ 2.33
SSBP3-202ENST00000357475 PARP1P09874 1014 aaKnown RBP29.61■■■□□ 2.33
SSBP3-202ENST00000357475 CALM1P0DP23 149 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 CALM2P0DP24 149 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 CALM3P0DP25 149 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 MCM2P49736 904 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 NBPF11Q86T75 865 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 BRI3BPQ8WY22 251 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 LPAR1Q92633 364 aa29.61■■■□□ 2.33
SSBP3-202ENST00000357475 RPAP3Q9H6T3 665 aaPredicted RBP29.61■■■□□ 2.33
SSBP3-202ENST00000357475 RLFQ13129 1914 aa29.6■■■□□ 2.33
SSBP3-202ENST00000357475 PPFIA3O75145 1194 aa29.6■■■□□ 2.33
SSBP3-202ENST00000357475 BMP3P12645 472 aa29.6■■■□□ 2.33
SSBP3-202ENST00000357475 DEFB115Q30KQ5 88 aa29.6■■■□□ 2.33
SSBP3-202ENST00000357475 GTF3C6Q969F1 213 aa29.6■■■□□ 2.33
SSBP3-202ENST00000357475 WDR46O15213 610 aaKnown RBP29.59■■■□□ 2.33
SSBP3-202ENST00000357475 SLC16A2P36021 539 aa29.59■■■□□ 2.33
SSBP3-202ENST00000357475 GTF2A2P52657 109 aa29.59■■■□□ 2.33
SSBP3-202ENST00000357475 RCAN1P53805 252 aa29.59■■■□□ 2.33
SSBP3-202ENST00000357475 GPAT2Q6NUI2 795 aa29.59■■■□□ 2.33
SSBP3-202ENST00000357475 CCDC83Q8IWF9 413 aa29.59■■■□□ 2.33
SSBP3-202ENST00000357475 CTCFLQ8NI51 663 aaPredicted RBP29.59■■■□□ 2.33
SSBP3-202ENST00000357475 MAP3K14Q99558 947 aa29.59■■■□□ 2.33
SSBP3-202ENST00000357475 UBA5Q9GZZ9 404 aa29.59■■■□□ 2.33
SSBP3-202ENST00000357475 FBXO28Q9NVF7 368 aa29.59■■■□□ 2.33
SSBP3-202ENST00000357475 CCL15-CCL14A0A0B4J2E2 113 aa29.58■■■□□ 2.33
SSBP3-202ENST00000357475 K7ELQ4 463 aaPredicted RBP29.58■■■□□ 2.33
SSBP3-202ENST00000357475 C1QTNF8P60827 252 aa29.58■■■□□ 2.33
SSBP3-202ENST00000357475 CCL15Q16663 113 aa29.58■■■□□ 2.33
SSBP3-202ENST00000357475 HSCBQ8IWL3 235 aa29.58■■■□□ 2.33
SSBP3-202ENST00000357475 CCDC102AQ96A19 550 aa29.58■■■□□ 2.33
SSBP3-202ENST00000357475 ZSCAN31Q96LW9 406 aaPredicted RBP29.58■■■□□ 2.33
SSBP3-202ENST00000357475 ASPRV1Q53RT3 343 aa29.57■■■□□ 2.32
SSBP3-202ENST00000357475 CCDC82Q8N4S0 544 aa29.57■■■□□ 2.32
SSBP3-202ENST00000357475 SRBD1Q8N5C6 995 aaKnown RBP29.57■■■□□ 2.32
SSBP3-202ENST00000357475 PROCA1Q8NCQ7 364 aaPredicted RBP29.57■■■□□ 2.32
SSBP3-202ENST00000357475 PTPN18Q99952 460 aa29.57■■■□□ 2.32
SSBP3-202ENST00000357475 TMEM232C9JQI7 657 aa29.56■■■□□ 2.32
SSBP3-202ENST00000357475 KLRF2D3W0D1 207 aa29.56■■■□□ 2.32
SSBP3-202ENST00000357475 CTDNEP1O95476 244 aa29.56■■■□□ 2.32
SSBP3-202ENST00000357475 TMTC3Q6ZXV5 915 aa29.56■■■□□ 2.32
SSBP3-202ENST00000357475 CAPNS2Q96L46 248 aa29.56■■■□□ 2.32
SSBP3-202ENST00000357475 TANGO6Q9C0B7 1094 aa29.56■■■□□ 2.32
SSBP3-202ENST00000357475 SH2B1Q9NRF2 756 aaPredicted RBP29.56■■■□□ 2.32
SSBP3-202ENST00000357475 AOC2O75106 756 aa29.55■■■□□ 2.32
SSBP3-202ENST00000357475 CETPP11597 493 aa29.55■■■□□ 2.32
SSBP3-202ENST00000357475 NTRK3Q16288 839 aa29.55■■■□□ 2.32
SSBP3-202ENST00000357475 CYTH3O43739 400 aa29.55■■■□□ 2.32
SSBP3-202ENST00000357475 KIF5BP33176 963 aa29.55■■■□□ 2.32
SSBP3-202ENST00000357475 SAMD1Q6SPF0 538 aaPredicted RBP29.55■■■□□ 2.32
SSBP3-202ENST00000357475 FASTKD5Q7L8L6 764 aaKnown RBP29.55■■■□□ 2.32
SSBP3-202ENST00000357475 AGTPBP1Q9UPW5 1226 aa29.55■■■□□ 2.32
SSBP3-202ENST00000357475 BTBD19C9JJ37 291 aa29.54■■■□□ 2.32
SSBP3-202ENST00000357475 FUT2Q10981 343 aa29.54■■■□□ 2.32
SSBP3-202ENST00000357475 GPATCH4Q5T3I0 446 aaKnown RBP29.54■■■□□ 2.32
SSBP3-202ENST00000357475 RBM28Q9NW13 759 aaKnown RBP29.54■■■□□ 2.32
SSBP3-202ENST00000357475 CATSPERGQ6ZRH7 1159 aa29.53■■■□□ 2.32
SSBP3-202ENST00000357475 FAM43AQ8N2R8 423 aa29.53■■■□□ 2.32
SSBP3-202ENST00000357475 TESPA1A2RU30 521 aaPredicted RBP29.52■■■□□ 2.32
SSBP3-202ENST00000357475 SNAP25P60880 206 aa29.52■■■□□ 2.32
SSBP3-202ENST00000357475 KIF23Q02241 960 aaPredicted RBP29.52■■■□□ 2.32
SSBP3-202ENST00000357475 IKQ13123 557 aaPredicted RBP29.52■■■□□ 2.32
SSBP3-202ENST00000357475 PIBF1Q8WXW3 757 aa29.52■■■□□ 2.32
SSBP3-202ENST00000357475 PHKBQ93100 1093 aa29.52■■■□□ 2.32
SSBP3-202ENST00000357475 MYH6P13533 1939 aa29.52■■■□□ 2.32
SSBP3-202ENST00000357475 COL11A1P12107 1806 aaPredicted RBP29.52■■■□□ 2.32
SSBP3-202ENST00000357475 CNTNAP5Q8WYK1 1306 aa29.52■■■□□ 2.32
SSBP3-202ENST00000357475 hCG_1642624A0A1W2PR95 340 aa29.51■■■□□ 2.32
SSBP3-202ENST00000357475 USP17L15C9J2P7 530 aa29.51■■■□□ 2.32
SSBP3-202ENST00000357475 USP17L13C9JLJ4 530 aa29.51■■■□□ 2.32
SSBP3-202ENST00000357475 USP17L11C9JVI0 530 aa29.51■■■□□ 2.32
SSBP3-202ENST00000357475 USP17L18D6R9N7 530 aa29.51■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms