RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 RPS6KA5O75582 802 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 HOXB7P09629 217 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 ABCD1P33897 745 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 LAMB3Q13751 1172 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 TAF12Q16514 161 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 SMCR8Q8TEV9 937 aaPredicted RBP8.51□□□□□ -1.05
LIN28B-201ENST00000345080 LMBR1Q8WVP7 490 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 PPP2R3CQ969Q6 453 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.51□□□□□ -1.05
LIN28B-201ENST00000345080 NIP7Q9Y221 180 aaKnown RBP eCLIP8.51□□□□□ -1.05
LIN28B-201ENST00000345080 KRT10P13645 584 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 EPHB4P54760 987 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 KARSQ15046 597 aaKnown RBP8.51□□□□□ -1.05
LIN28B-201ENST00000345080 SUPT20HL1Q3ZLR7 823 aa8.51□□□□□ -1.05
LIN28B-201ENST00000345080 BAG2O95816 211 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 CPP00450 1065 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 SYKP43405 635 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 MRPS35P82673 323 aaKnown RBP8.5□□□□□ -1.05
LIN28B-201ENST00000345080 CFAP157Q5JU67 520 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 WAPLQ7Z5K2 1190 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 ZNF444Q8N0Y2 327 aaPredicted RBP8.5□□□□□ -1.05
LIN28B-201ENST00000345080 NEK1Q96PY6 1258 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 IL1RAPL2Q9NP60 686 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 TSPOAP1O95153 1857 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 CAPN15O75808 1086 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 FLOT2Q14254 428 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 MAP3K21Q5TCX8 1036 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 EP400NLQ6ZTU2 488 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 TRIM11Q96F44 468 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 MKNK2Q9HBH9 465 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 SPINK5Q9NQ38 1064 aaPredicted RBP8.5□□□□□ -1.05
LIN28B-201ENST00000345080 PNMA2Q9UL42 364 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 MEFVO15553 781 aaPredicted RBP8.5□□□□□ -1.05
LIN28B-201ENST00000345080 MAN1A2O60476 641 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 CCDC93Q567U6 631 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 LEO1Q8WVC0 666 aaPredicted RBP8.5□□□□□ -1.05
LIN28B-201ENST00000345080 ZNF653Q96CK0 615 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 TUBB6Q9BUF5 446 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 MTRF1LQ9UGC7 380 aaKnown RBP8.5□□□□□ -1.05
LIN28B-201ENST00000345080 ZNF335Q9H4Z2 1342 aaPredicted RBP8.5□□□□□ -1.05
LIN28B-201ENST00000345080 PPIP5K2O43314 1243 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 KRT14P02533 472 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 ZBTB33Q86T24 672 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 DZIP3Q86Y13 1208 aaKnown RBP8.5□□□□□ -1.05
LIN28B-201ENST00000345080 OSBPL3Q9H4L5 887 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 PLEKHA4Q9H4M7 779 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 TET3O43151 1660 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 ERVK-7P63135 1459 aa8.5□□□□□ -1.05
LIN28B-201ENST00000345080 RNASELQ05823 741 aaKnown RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 SND1Q7KZF4 910 aaKnown RBP eCLIP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 ST13P4Q8IZP2 240 aaPredicted RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 VPS52Q8N1B4 723 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 CCDC26Q8TAB7 109 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 ZNF483Q8TF39 744 aaPredicted RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 HNRNPLLQ8WVV9 542 aaKnown RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 MAML3Q96JK9 1138 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 TUBA8Q9NY65 449 aaPredicted RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 ATP5HO75947 161 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 KRT75O95678 551 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 LRMPQ12912 555 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 TTF1Q15361 905 aaPredicted RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 KIAA0753Q2KHM9 967 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 FYB2Q5VWT5 728 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 NAIF1Q69YI7 327 aaPredicted RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 PLA2G4DQ86XP0 818 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 SIX5Q8N196 739 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 MIEF2Q96C03 454 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 LZTFL1Q9NQ48 299 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 A1CFQ9NQ94 594 aaKnown RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 ZNF148Q9UQR1 794 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 NOC2LQ9Y3T9 749 aaKnown RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 A0A1W2PP64 1363 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 TMEM2Q9UHN6 1383 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 ATP5J2-PTCD1G3V325 749 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 GADD45BO75293 160 aaPredicted RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 IREB2P48200 963 aaKnown RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 MAP3K12Q12852 859 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 PPP1R21Q6ZMI0 780 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 FGD4Q96M96 766 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 KCNH4Q9UQ05 1017 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 APOEP02649 317 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 HSP90AA4PQ58FG1 418 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 SLC16A10Q8TF71 515 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 TXLNGQ9NUQ3 528 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 GIMAP4Q9NUV9 329 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 WDR70Q9NW82 654 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 ARAP3Q8WWN8 1544 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 PTCH1Q13635 1447 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 SLC4A1P02730 911 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 H2AFXP16104 143 aaPredicted RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 DMPKQ09013 629 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 IFT88Q13099 833 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 PPANQ9NQ55 473 aaKnown RBP8.49□□□□□ -1.05
LIN28B-201ENST00000345080 CNGB3Q9NQW8 809 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 BCAP29Q9UHQ4 241 aa8.49□□□□□ -1.05
LIN28B-201ENST00000345080 CAND2O75155 1236 aa8.48□□□□□ -1.05
LIN28B-201ENST00000345080 CETN2P41208 172 aa8.48□□□□□ -1.05
LIN28B-201ENST00000345080 SREBF2Q12772 1141 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms