RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PDHBP11177 359 aa20.04■□□□□ 0.8
CLDN4-201ENST00000340958 HTRA3P83110 453 aa20.04■□□□□ 0.8
CLDN4-201ENST00000340958 TRAK2O60296 914 aa20.03■□□□□ 0.8
CLDN4-201ENST00000340958 SKOR2Q2VWA4 1001 aaPredicted RBP20.03■□□□□ 0.8
CLDN4-201ENST00000340958 ASPRV1Q53RT3 343 aa20.03■□□□□ 0.8
CLDN4-201ENST00000340958 HOOK2Q96ED9 719 aa20.03■□□□□ 0.8
CLDN4-201ENST00000340958 ARHGEF10LQ9HCE6 1279 aa20.03■□□□□ 0.8
CLDN4-201ENST00000340958 RASGRP2Q7LDG7 609 aa20.02■□□□□ 0.8
CLDN4-201ENST00000340958 ZNF396Q96N95 335 aaPredicted RBP20.02■□□□□ 0.8
CLDN4-201ENST00000340958 GPCPD1Q9NPB8 672 aa20.02■□□□□ 0.8
CLDN4-201ENST00000340958 VPS54Q9P1Q0 977 aa20.02■□□□□ 0.8
CLDN4-201ENST00000340958 CFAP45Q9UL16 551 aa20.02■□□□□ 0.8
CLDN4-201ENST00000340958 SCG2P13521 617 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 RRP1BQ14684 758 aaKnown RBP20.02■□□□□ 0.79
CLDN4-201ENST00000340958 TPRNQ4KMQ1 711 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 DCAF15Q66K64 600 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 DLK2Q6UY11 383 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 BRAPQ7Z569 592 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 USP48Q86UV5 1035 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 MKL1Q969V6 931 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 DCPSQ96C86 337 aaKnown RBP20.02■□□□□ 0.79
CLDN4-201ENST00000340958 VAT1LQ9HCJ6 419 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.79
CLDN4-201ENST00000340958 SEC63Q9UGP8 760 aaKnown RBP20.02■□□□□ 0.79
CLDN4-201ENST00000340958 ZBTB21Q9ULJ3 1066 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 KCNJ14Q9UNX9 436 aa20.02■□□□□ 0.79
CLDN4-201ENST00000340958 SLC1A4P43007 532 aa20.01■□□□□ 0.79
CLDN4-201ENST00000340958 KIF23Q02241 960 aaPredicted RBP20.01■□□□□ 0.79
CLDN4-201ENST00000340958 PKN1Q16512 942 aa20.01■□□□□ 0.79
CLDN4-201ENST00000340958 SLFN13Q68D06 897 aa20.01■□□□□ 0.79
CLDN4-201ENST00000340958 RRP36Q96EU6 259 aaKnown RBP20.01■□□□□ 0.79
CLDN4-201ENST00000340958 TEPSINQ96N21 525 aa20.01■□□□□ 0.79
CLDN4-201ENST00000340958 BRMS1Q9HCU9 246 aa20.01■□□□□ 0.79
CLDN4-201ENST00000340958 LMBRD1Q9NUN5 540 aa20.01■□□□□ 0.79
CLDN4-201ENST00000340958 DDX49Q9Y6V7 483 aaKnown RBP20.01■□□□□ 0.79
CLDN4-201ENST00000340958 ADM5C9JUS6 153 aa20■□□□□ 0.79
CLDN4-201ENST00000340958 MMP1P03956 469 aa20■□□□□ 0.79
CLDN4-201ENST00000340958 CAP2P40123 477 aa20■□□□□ 0.79
CLDN4-201ENST00000340958 PFKFB3Q16875 520 aaPredicted RBP20■□□□□ 0.79
CLDN4-201ENST00000340958 GPATCH4Q5T3I0 446 aaKnown RBP20■□□□□ 0.79
CLDN4-201ENST00000340958 KRT26Q7Z3Y9 468 aa20■□□□□ 0.79
CLDN4-201ENST00000340958 SCAND2PQ9GZW5 306 aaPredicted RBP20■□□□□ 0.79
CLDN4-201ENST00000340958 UBA5Q9GZZ9 404 aa20■□□□□ 0.79
CLDN4-201ENST00000340958 JAG1P78504 1218 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 CEBPZQ03701 1054 aaKnown RBP19.99■□□□□ 0.79
CLDN4-201ENST00000340958 NBPF12Q5TAG4 269 aaPredicted RBP19.99■□□□□ 0.79
CLDN4-201ENST00000340958 HOMER1Q86YM7 354 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 SPATA32Q96LK8 384 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 SPZ1Q9BXG8 430 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 CPVLQ9H3G5 476 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 PPP2R3BQ9Y5P8 575 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 ASNSP08243 561 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 NLRP5P59047 1200 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 ZNF543Q08ER8 600 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 PRAMEF18Q5VWM3 479 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 HEATR3Q7Z4Q2 680 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 DIS3L2Q8IYB7 885 aaKnown RBP19.99■□□□□ 0.79
CLDN4-201ENST00000340958 DCAF4Q8WV16 495 aa19.99■□□□□ 0.79
CLDN4-201ENST00000340958 SNHG28P0DPA3 235 aa19.98■□□□□ 0.79
CLDN4-201ENST00000340958 SMARCA1P28370 1054 aa19.98■□□□□ 0.79
CLDN4-201ENST00000340958 KCTD1Q719H9 257 aa19.98■□□□□ 0.79
CLDN4-201ENST00000340958 SULF1Q8IWU6 871 aa19.98■□□□□ 0.79
CLDN4-201ENST00000340958 PITPNM2Q9BZ72 1349 aa19.98■□□□□ 0.79
CLDN4-201ENST00000340958 GOLGA6L4A6NEF3 574 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 KIF28PB7ZC32 967 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 F5H6K3 240 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 CYTH3O43739 400 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 MAP3K10Q02779 954 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 KLRC3Q07444 240 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 IKQ13123 557 aaPredicted RBP19.97■□□□□ 0.79
CLDN4-201ENST00000340958 ATL3Q6DD88 541 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 ZNF341Q9BYN7 854 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 SH2D4AQ9H788 454 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 GOPCQ9HD26 462 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 BTBD18B2RXH4 712 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 KRT2P35908 639 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 SUPT20HL1Q3ZLR7 823 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 SIAH1Q8IUQ4 282 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 GMCL1P1Q8NEA9 526 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 GPKOWQ92917 476 aaPredicted RBP eCLIP19.97■□□□□ 0.79
CLDN4-201ENST00000340958 CREBZFQ9NS37 354 aa19.97■□□□□ 0.79
CLDN4-201ENST00000340958 GREB1LQ9C091 1923 aaPredicted RBP19.97■□□□□ 0.79
CLDN4-201ENST00000340958 TMEM88BA6NKF7 163 aa19.96■□□□□ 0.79
CLDN4-201ENST00000340958 CST9Q5W186 159 aa19.96■□□□□ 0.79
CLDN4-201ENST00000340958 TMEM87AQ8NBN3 555 aa19.96■□□□□ 0.79
CLDN4-201ENST00000340958 FEZ1Q99689 392 aa19.96■□□□□ 0.79
CLDN4-201ENST00000340958 PHF20Q9BVI0 1012 aa19.96■□□□□ 0.79
CLDN4-201ENST00000340958 FOXP1Q9H334 677 aaPredicted RBP19.96■□□□□ 0.79
CLDN4-201ENST00000340958 MYH6P13533 1939 aa19.96■□□□□ 0.79
CLDN4-201ENST00000340958 MYH4Q9Y623 1939 aa19.96■□□□□ 0.79
CLDN4-201ENST00000340958 PCNTO95613 3336 aa19.96■□□□□ 0.79
CLDN4-201ENST00000340958 ECE1P42892 770 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 MYSM1Q5VVJ2 828 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 TTBK2Q6IQ55 1244 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 NOSTRINQ8IVI9 506 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 CCDC148Q8NFR7 591 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 PIGSQ96S52 555 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 ZNF408Q9H9D4 720 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 SH3GLB2Q9NR46 395 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms