RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 SMTNP53814 917 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 ARHGEF16Q5VV41 709 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 LRWD1Q9UFC0 647 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 SETD1BQ9UPS6 1966 aaKnown RBP14.3□□□□□ -0.12
DNMT1-201ENST00000340748 ZNF521Q96K83 1311 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 A0A0D9SFI3 127 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 CETN3O15182 167 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 RHOXF2BP0C7M4 288 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 SEL1L2Q5TEA6 688 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 PODNQ7Z5L7 613 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 RHOXF2Q9BQY4 288 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 MYL10Q9BUA6 226 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 OSBPL3Q9H4L5 887 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 CELF2O95319 508 aaKnown RBP14.3□□□□□ -0.12
DNMT1-201ENST00000340748 PTH1RQ03431 593 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 NBPF11Q86T75 865 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 EXOC7Q9UPT5 735 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 ATP6V0A2Q9Y487 856 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 ARHGAP6O43182 974 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 EVCP57679 992 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 COL23A1Q86Y22 540 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-201ENST00000340748 CCDC26Q8TAB7 109 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 GPR108Q9NPR9 543 aa14.3□□□□□ -0.12
DNMT1-201ENST00000340748 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-201ENST00000340748 MYSM1Q5VVJ2 828 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 CHMP2AO43633 222 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 GLG1Q92896 1179 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 TRIM6Q9C030 488 aaPredicted RBP14.29□□□□□ -0.12
DNMT1-201ENST00000340748 COPRSQ9NQ92 184 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 CNOT7Q9UIV1 285 aaKnown RBP14.29□□□□□ -0.12
DNMT1-201ENST00000340748 SPHKAPQ2M3C7 1700 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 ARID4AP29374 1257 aaPredicted RBP14.29□□□□□ -0.12
DNMT1-201ENST00000340748 ASIC2Q16515 512 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 WDR44Q5JSH3 913 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 ANKS4BQ8N8V4 417 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 ZMYM6O95789 1325 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 HUNKP57058 714 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 FAM47AQ5JRC9 791 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 POTEAQ6S8J7 498 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 JAKMIP2Q96AA8 810 aa14.29□□□□□ -0.12
DNMT1-201ENST00000340748 PUS3Q9BZE2 481 aaKnown RBP14.29□□□□□ -0.12
DNMT1-201ENST00000340748 CIAO1O76071 339 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 GDF11O95390 407 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 FERP16591 822 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 GNPTABQ3T906 1256 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 RAET1EQ8TD07 263 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 WRNIP1Q96S55 665 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 ZNF341Q9BYN7 854 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 NFE2L3Q9Y4A8 694 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 DDX39AO00148 427 aaKnown RBP14.28□□□□□ -0.12
DNMT1-201ENST00000340748 CALCRLQ16602 461 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 NLRX1Q86UT6 975 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 ZNF654Q8IZM8 581 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 RRAGCQ9HB90 399 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 USP17L12C9JPN9 530 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 USP17L21D6R901 530 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 TNFAIP3P21580 790 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 GJC1P36383 396 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 IFT81Q8WYA0 676 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
DNMT1-201ENST00000340748 HSPD1P10809 573 aaKnown RBP14.28□□□□□ -0.12
DNMT1-201ENST00000340748 CAPN2P17655 700 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 CABP7Q86V35 215 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 IFNL3Q8IZI9 196 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 ATRIPQ8WXE1 791 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 PPP1R9BQ96SB3 815 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.28□□□□□ -0.12
DNMT1-201ENST00000340748 ADCY9O60503 1353 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 DNM2P50570 870 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 TGFB2P61812 414 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 TMEM63CQ9P1W3 806 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 VPS18Q9P253 973 aa14.28□□□□□ -0.12
DNMT1-201ENST00000340748 PPRC1Q5VV67 1664 aaKnown RBP14.27□□□□□ -0.12
DNMT1-201ENST00000340748 TERF1P54274 439 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 CALCOCO2Q13137 446 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 PPP1R7Q15435 360 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 CEP128Q6ZU80 1094 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 ZSCAN10Q96SZ4 725 aaPredicted RBP14.27□□□□□ -0.12
DNMT1-201ENST00000340748 FHDC1Q9C0D6 1143 aaPredicted RBP14.27□□□□□ -0.12
DNMT1-201ENST00000340748 RSPH14Q9UHP6 348 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 COMMD10Q9Y6G5 202 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 ZC3H13Q5T200 1668 aaKnown RBP14.27□□□□□ -0.12
DNMT1-201ENST00000340748 ATP2A2P16615 1042 aaKnown RBP14.27□□□□□ -0.12
DNMT1-201ENST00000340748 PHKA1P46020 1223 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 CFAP58Q5T655 872 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 NELFBQ8WX92 580 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 OTUD5Q96G74 571 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 FNBP1Q96RU3 617 aa14.27□□□□□ -0.12
DNMT1-201ENST00000340748 LSG1Q9H089 658 aaKnown RBP14.27□□□□□ -0.13
DNMT1-201ENST00000340748 PNMA2Q9UL42 364 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 TPCN1Q9ULQ1 816 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 DNM3Q9UQ16 869 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 CDK12Q9NYV4 1490 aaPredicted RBP14.27□□□□□ -0.13
DNMT1-201ENST00000340748 DIP2AQ14689 1571 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 PLCB3Q01970 1234 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 MCTP2Q6DN12 878 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 PRR5LQ6MZQ0 368 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms