RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 NCOA4Q13772 614 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 LRRC24Q50LG9 513 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 MCTP2Q6DN12 878 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 SH3TC2Q8TF17 1288 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 FAM84BQ96KN1 310 aaPredicted RBP5.63□□□□□ -1.51
MSL1-201ENST00000339569 APBA2Q99767 749 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 KRT23Q9C075 422 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 DEFB129Q9H1M3 183 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 USP17L5A8MUK1 530 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 SERPINB2P05120 415 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 RASA1P20936 1047 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 PDCP20941 246 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 HMGN5P82970 282 aaKnown RBP5.63□□□□□ -1.51
MSL1-201ENST00000339569 DDR1Q08345 913 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 DPYDQ12882 1025 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 TTC39AQ5SRH9 613 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 ZNF804AQ7Z570 1209 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 ZNF408Q9H9D4 720 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 CASS4Q9NQ75 786 aa5.63□□□□□ -1.51
MSL1-201ENST00000339569 ARPP21Q9UBL0 812 aaPredicted RBP5.63□□□□□ -1.51
MSL1-201ENST00000339569 DDX11L8A8MPP1 907 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 ANXA1P04083 346 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 CALM1P0DP23 149 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 CALM2P0DP24 149 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 CALM3P0DP25 149 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 GHRHRQ02643 423 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 AIMP1Q12904 312 aaKnown RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 Q3C1V9 767 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 CAVIN4Q5BKX8 364 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 METTL24Q5JXM2 366 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 KIAA1211Q6ZU35 1233 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 DHX32Q7L7V1 743 aaKnown RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 CNBD1Q8NA66 436 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 SRPK1Q96SB4 655 aaKnown RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 NELL2Q99435 816 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 LZTS2Q9BRK4 669 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 SH3GLB2Q9NR46 395 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 CNTN3Q9P232 1028 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 SCN9AQ15858 1988 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 HSPD1P10809 573 aaKnown RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 CDC27P30260 824 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 NFE2Q16621 373 aaPredicted RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 TMEM106CQ9BVX2 250 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 IDI2Q9BXS1 227 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 SRA1Q9HD15 236 aaKnown RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 DDX41Q9UJV9 622 aaKnown RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 HDAC9Q9UKV0 1011 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 PALD1Q9ULE6 856 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 IGKV6D-41A0A0C4DH26 115 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 ATP5J2-PTCD1G3V325 749 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 TSPAN6O43657 245 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 DDAH1O94760 285 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 COPB2P35606 906 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 INO80DQ53TQ3 878 aaPredicted RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 CT47A1Q5JQC4 288 aaPredicted RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 RTKN2Q8IZC4 609 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 RGL4Q8IZJ4 473 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 UBR7Q8N806 425 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 SNTG2Q9NY99 539 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 PA2G4Q9UQ80 394 aaKnown RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 KIF3AQ9Y496 699 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 DAAM1Q9Y4D1 1078 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 RBM8AQ9Y5S9 174 aaKnown RBP5.62□□□□□ -1.51
MSL1-201ENST00000339569 CYP46A1Q9Y6A2 500 aa5.62□□□□□ -1.51
MSL1-201ENST00000339569 SPTLC1O15269 473 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 RNASEH2AO75792 299 aaKnown RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 PDE6AP16499 860 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 RPS12P25398 132 aaKnown RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 GALNT17Q6IS24 598 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 NBPF5PQ86XG9 351 aaPredicted RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 EMID1Q96A84 441 aaPredicted RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 SYTL4Q96C24 671 aaPredicted RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 NSUN4Q96CB9 384 aaKnown RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 ZSCAN16Q9H4T2 348 aaPredicted RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 STK32BQ9NY57 414 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 TLR7Q9NYK1 1049 aaKnown RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 MRPS23Q9Y3D9 190 aaKnown RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 MYH4Q9Y623 1939 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 THSD7BQ9C0I4 1608 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 A0A0D9SFI3 127 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 IGHA2P01877 340 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 BAG6P46379 1132 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 RASA3Q14644 834 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 NR6A1Q15406 480 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 ZNF827Q17R98 1081 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 SLC4A8Q2Y0W8 1093 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 PLEKHG4Q58EX7 1191 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 STRIP1Q5VSL9 837 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 COL23A1Q86Y22 540 aaPredicted RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 DAGLBQ8NCG7 672 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 VPS37AQ8NEZ2 397 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 NKX2-3Q8TAU0 364 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 MPHOSPH8Q99549 860 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.61□□□□□ -1.511e-10■■■■■ 38.1
MSL1-201ENST00000339569 RSPH9Q9H1X1 276 aaPredicted RBP5.61□□□□□ -1.51
MSL1-201ENST00000339569 VTI1BQ9UEU0 232 aa5.61□□□□□ -1.51
MSL1-201ENST00000339569 MROH7-TTC4A0A0A0MT08 1334 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms