RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CCDC88AQ3V6T2 1871 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 PNOCQ13519 176 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 TOGARAM2Q6ZUX3 1019 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 DHX58Q96C10 678 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 C6orf229H3BNL8 230 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 TRIM66O15016 1216 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 USP17L8P0C7I0 530 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 LMAN1P49257 510 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 BRD3Q15059 726 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 FLAD1Q8NFF5 587 aa21.3■■□□□ 1
PSPC1-201ENST00000338910 ANKRD31Q8N7Z5 1873 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 PPEF1O14829 653 aaPredicted RBP21.29■■□□□ 1
PSPC1-201ENST00000338910 DEXIO95424 95 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 MMP1P03956 469 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 SRGNP10124 158 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 RCAN1P53805 252 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 CATIPQ7Z7H3 387 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 TC2NQ8N9U0 490 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 RSPH14Q9UHP6 348 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.29■■□□□ 1
PSPC1-201ENST00000338910 FAM237AA0A1B0GTK4 181 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 hCG_1642624A0A1W2PR95 340 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 PCP11498 1178 aaKnown RBP21.29■■□□□ 1
PSPC1-201ENST00000338910 SHC4Q6S5L8 630 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 POTEAQ6S8J7 498 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 SRLQ86TD4 932 aa21.29■■□□□ 1
PSPC1-201ENST00000338910 DIS3L2Q8IYB7 885 aaKnown RBP21.29■■□□□ 1
PSPC1-201ENST00000338910 ACTN2P35609 894 aa21.28■■□□□ 1
PSPC1-201ENST00000338910 USP5P45974 858 aa21.28■■□□□ 1
PSPC1-201ENST00000338910 SAFBQ15424 915 aaKnown RBP eCLIP21.28■■□□□ 1
PSPC1-201ENST00000338910 OLFM4Q6UX06 510 aa21.28■■□□□ 1
PSPC1-201ENST00000338910 C10orf67Q8IYJ2 551 aa21.28■■□□□ 1
PSPC1-201ENST00000338910 SH3RF3Q8TEJ3 882 aaPredicted RBP21.28■■□□□ 1
PSPC1-201ENST00000338910 ARPP21Q9UBL0 812 aaPredicted RBP21.28■■□□□ 1
PSPC1-201ENST00000338910 NOSTRINQ8IVI9 506 aa21.28■■□□□ 1
PSPC1-201ENST00000338910 MAP3K14Q99558 947 aa21.28■■□□□ 1
PSPC1-201ENST00000338910 EFCC1Q9HA90 598 aa21.28■■□□□ 1
PSPC1-201ENST00000338910 DUOX1Q9NRD9 1551 aa21.28■■□□□ 1
PSPC1-201ENST00000338910 IL1R1P14778 569 aa21.27■■□□□ 1
PSPC1-201ENST00000338910 PTPAQ15257 358 aa21.27■■□□□ 1
PSPC1-201ENST00000338910 METTL16Q86W50 562 aaKnown RBP21.27■■□□□ 1
PSPC1-201ENST00000338910 FOXP4Q8IVH2 680 aaPredicted RBP21.27■■□□□ 1
PSPC1-201ENST00000338910 SP8Q8IXZ3 490 aa21.27■■□□□ 1
PSPC1-201ENST00000338910 HNRNPLLQ8WVV9 542 aaKnown RBP21.27■■□□□ 1
PSPC1-201ENST00000338910 ORC4O43929 436 aa21.27■■□□□ 1
PSPC1-201ENST00000338910 PPP6R2O75170 966 aa21.27■■□□□ 1
PSPC1-201ENST00000338910 AKAP17AQ02040 695 aaKnown RBP21.27■■□□□ 1
PSPC1-201ENST00000338910 TROAPQ12815 778 aa21.27■■□□□ 1
PSPC1-201ENST00000338910 SBK1Q52WX2 424 aa21.27■■□□□ 1
PSPC1-201ENST00000338910 PLEKHA8P1O95397 391 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 PDE4BQ07343 736 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 NR5A1Q13285 461 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 ATP6V0A2Q9Y487 856 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 V9GY48 417 aaPredicted RBP21.26■□□□□ 0.99
PSPC1-201ENST00000338910 MAST2Q6P0Q8 1798 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 TSPY2A6NKD2 308 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 BMP6P22004 513 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 PPP2R5BQ15173 497 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 SPECC1LQ69YQ0 1117 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 TMED8Q6PL24 325 aaPredicted RBP21.26■□□□□ 0.99
PSPC1-201ENST00000338910 PDILTQ8N807 584 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 CLIC6Q96NY7 704 aa21.26■□□□□ 0.99
PSPC1-201ENST00000338910 RRP15Q9Y3B9 282 aaKnown RBP21.26■□□□□ 0.99
PSPC1-201ENST00000338910 NPR1P16066 1061 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 TNNT3P45378 269 aaPredicted RBP21.25■□□□□ 0.99
PSPC1-201ENST00000338910 ADKP55263 362 aaKnown RBP21.25■□□□□ 0.99
PSPC1-201ENST00000338910 BEND6Q5SZJ8 279 aaPredicted RBP21.25■□□□□ 0.99
PSPC1-201ENST00000338910 RESP18Q5W5W9 173 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 OXER1Q8TDS5 423 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 CCDC12Q8WUD4 166 aaPredicted RBP21.25■□□□□ 0.99
PSPC1-201ENST00000338910 DYNLL2Q96FJ2 89 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 RNF26Q9BY78 433 aaPredicted RBP21.25■□□□□ 0.99
PSPC1-201ENST00000338910 RIMBP2O15034 1052 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 GSTO1P78417 241 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 TMC4Q7Z404 712 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 SRGAP1Q7Z6B7 1085 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 MSL3Q8N5Y2 521 aaKnown RBP21.25■□□□□ 0.99
PSPC1-201ENST00000338910 JMYQ8N9B5 988 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 TGFBRAP1Q8WUH2 860 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 ANKZF1Q9H8Y5 726 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 MKRN1Q9UHC7 482 aaKnown RBP21.25■□□□□ 0.99
PSPC1-201ENST00000338910 PCDHA5Q9Y5H7 936 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 ECM29Q5VYK3 1845 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 TNS1Q9HBL0 1735 aaKnown RBP21.25■□□□□ 0.99
PSPC1-201ENST00000338910 NRXN2Q9P2S2 1712 aa21.25■□□□□ 0.99
PSPC1-201ENST00000338910 CUTAO60888 179 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 BAG3O95817 575 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 TOB1P50616 345 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-201ENST00000338910 CHMP4BP1P59074 171 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 DESI2Q9BSY9 194 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 MRPL44Q9H9J2 332 aaKnown RBP21.24■□□□□ 0.99
PSPC1-201ENST00000338910 VPS54Q9P1Q0 977 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 ZNF18P17022 549 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 ATP2B1P20020 1258 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 PDE6BP35913 854 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 EN1Q05925 392 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-201ENST00000338910 FUT2Q10981 343 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 KARSQ15046 597 aaKnown RBP21.24■□□□□ 0.99
PSPC1-201ENST00000338910 EZH2Q15910 746 aaKnown RBP21.24■□□□□ 0.99
PSPC1-201ENST00000338910 PKN1Q16512 942 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms