RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 RRAGBQ5VZM2 374 aa20.15■□□□□ 0.82
IFFO1-201ENST00000336604 CREBRFQ8IUR6 639 aa20.15■□□□□ 0.82
IFFO1-201ENST00000336604 NEK11Q8NG66 645 aa20.15■□□□□ 0.82
IFFO1-201ENST00000336604 MAPK8IP1Q9UQF2 711 aa20.15■□□□□ 0.82
IFFO1-201ENST00000336604 PFKFB3Q16875 520 aaPredicted RBP20.15■□□□□ 0.82
IFFO1-201ENST00000336604 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
IFFO1-201ENST00000336604 CRNKL1Q9BZJ0 848 aaKnown RBP20.15■□□□□ 0.82
IFFO1-201ENST00000336604 ZSWIM4Q9H7M6 989 aa20.15■□□□□ 0.82
IFFO1-201ENST00000336604 KRT31Q15323 416 aa20.14■□□□□ 0.82
IFFO1-201ENST00000336604 RCSD1Q6JBY9 416 aa20.14■□□□□ 0.82
IFFO1-201ENST00000336604 RSRC2Q7L4I2 434 aaKnown RBP20.14■□□□□ 0.82
IFFO1-201ENST00000336604 LINC00116Q8NCU8 138 aa20.14■□□□□ 0.82
IFFO1-201ENST00000336604 TBC1D9BQ66K14 1250 aa20.14■□□□□ 0.81
IFFO1-201ENST00000336604 GPKOWQ92917 476 aaPredicted RBP eCLIP20.14■□□□□ 0.81
IFFO1-201ENST00000336604 NAA15Q9BXJ9 866 aaKnown RBP20.14■□□□□ 0.81
IFFO1-201ENST00000336604 VPS16Q9H269 839 aa20.14■□□□□ 0.81
IFFO1-201ENST00000336604 SEMA3EO15041 775 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 N4BP3O15049 544 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 TPM1P09493 284 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 GPR161Q8N6U8 529 aaKnown RBP20.13■□□□□ 0.81
IFFO1-201ENST00000336604 RASGRP4Q8TDF6 673 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 FAM205AQ6ZU69 1335 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 RREB1Q92766 1687 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 MYH13Q9UKX3 1938 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 HIBADHP31937 336 aaKnown RBP20.13■□□□□ 0.81
IFFO1-201ENST00000336604 TRIM34Q9BYJ4 488 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 SCN7AQ01118 1682 aa20.13■□□□□ 0.81
IFFO1-201ENST00000336604 RNF225M0QZC1 329 aaPredicted RBP20.12■□□□□ 0.81
IFFO1-201ENST00000336604 SASH3O75995 380 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 USP17L8P0C7I0 530 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 TRAPPC10P48553 1259 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 RPS8P62241 208 aaKnown RBP20.12■□□□□ 0.81
IFFO1-201ENST00000336604 TXNRD3Q86VQ6 643 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 ATP8A2Q9NTI2 1148 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 MCM9Q9NXL9 1143 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 TULP2O00295 520 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 RASGRP2Q7LDG7 609 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 CNGA4Q8IV77 575 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 ACRBPQ8NEB7 543 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 PARD6BQ9BYG5 372 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 TAB2Q9NYJ8 693 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.12■□□□□ 0.81
IFFO1-201ENST00000336604 GDAQ9Y2T3 454 aa20.12■□□□□ 0.81
IFFO1-201ENST00000336604 THRAP3Q9Y2W1 955 aaKnown RBP20.12■□□□□ 0.81
IFFO1-201ENST00000336604 ABL1P00519 1130 aa20.11■□□□□ 0.81
IFFO1-201ENST00000336604 PAK1Q13153 545 aa20.11■□□□□ 0.81
IFFO1-201ENST00000336604 CC2D1AQ6P1N0 951 aaPredicted RBP20.11■□□□□ 0.81
IFFO1-201ENST00000336604 STAG2Q8N3U4 1231 aa20.11■□□□□ 0.81
IFFO1-201ENST00000336604 ARPP21Q9UBL0 812 aaPredicted RBP20.11■□□□□ 0.81
IFFO1-201ENST00000336604 A0A1B0GUL6 1792 aa20.11■□□□□ 0.81
IFFO1-201ENST00000336604 GTPBP6O43824 516 aaPredicted RBP20.11■□□□□ 0.81
IFFO1-201ENST00000336604 KIF5CO60282 957 aa20.11■□□□□ 0.81
IFFO1-201ENST00000336604 NELFBQ8WX92 580 aa20.11■□□□□ 0.81
IFFO1-201ENST00000336604 RWDD2AQ9UIY3 292 aa20.11■□□□□ 0.81
IFFO1-201ENST00000336604 TBC1D8O95759 1140 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 TYW1BQ6NUM6 668 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 ZCCHC17Q9NP64 241 aaKnown RBP20.1■□□□□ 0.81
IFFO1-201ENST00000336604 LIMA1Q9UHB6 759 aaKnown RBP20.1■□□□□ 0.81
IFFO1-201ENST00000336604 LRRC10BA6NIK2 292 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 RPN1P04843 607 aaKnown RBP20.1■□□□□ 0.81
IFFO1-201ENST00000336604 ERVK-24P63145 666 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 ZNF569Q5MCW4 686 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 C4orf32Q8N8J7 132 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 GOLGA1Q92805 767 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 IL17RBQ9NRM6 502 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 ITIH6Q6UXX5 1313 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 TFRCP02786 760 aaKnown RBP20.1■□□□□ 0.81
IFFO1-201ENST00000336604 KIF5BP33176 963 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 TFAP4Q01664 338 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 RAD51AP2Q09MP3 1159 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 TCP11X2Q5H9J9 407 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 ZNF658Q5TYW1 1059 aaPredicted RBP20.1■□□□□ 0.81
IFFO1-201ENST00000336604 IPO4Q8TEX9 1081 aaKnown RBP20.1■□□□□ 0.81
IFFO1-201ENST00000336604 RABGGTAQ92696 567 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 SMARCC1Q92922 1105 aaPredicted RBP20.1■□□□□ 0.81
IFFO1-201ENST00000336604 KAT14Q9H8E8 782 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 ABHD10Q9NUJ1 306 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 PUF60Q9UHX1 559 aaKnown RBP20.1■□□□□ 0.81
IFFO1-201ENST00000336604 MTMR7Q9Y216 660 aa20.1■□□□□ 0.81
IFFO1-201ENST00000336604 DLEC1Q9Y238 1755 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 PP2D1A8MPX8 630 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 KCNJ18B7U540 433 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 PRCPP42785 496 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 COPB1P53618 953 aaKnown RBP20.09■□□□□ 0.81
IFFO1-201ENST00000336604 KCNJ12Q14500 433 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 SLC51AQ86UW1 340 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 DYNLL2Q96FJ2 89 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 NUP88Q99567 741 aaPredicted RBP20.09■□□□□ 0.81
IFFO1-201ENST00000336604 STAT6P42226 847 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 ST5P78524 1137 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 SBK1Q52WX2 424 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 PNMA1Q8ND90 353 aa20.09■□□□□ 0.81
IFFO1-201ENST00000336604 SRP68Q9UHB9 627 aaKnown RBP20.09■□□□□ 0.81
IFFO1-201ENST00000336604 TRIM49BA6NDI0 452 aa20.08■□□□□ 0.81
IFFO1-201ENST00000336604 CHMP4BP1P59074 171 aa20.08■□□□□ 0.81
IFFO1-201ENST00000336604 ARL6IP4Q66PJ3 421 aaKnown RBP20.08■□□□□ 0.81
IFFO1-201ENST00000336604 NLRP3Q96P20 1036 aa20.08■□□□□ 0.81
IFFO1-201ENST00000336604 CALML3P27482 149 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms