RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 USP46P62068 366 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 TMEM154Q6P9G4 183 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 TESK2Q96S53 571 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 ESYT1Q9BSJ8 1104 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 FTOQ9C0B1 505 aaKnown RBP eCLIP9.53□□□□□ -0.88
TDP1-201ENST00000335725 DCTPP1Q9H773 170 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 MED14O60244 1454 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 E7ENQ6 273 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 TTI1O43156 1089 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 NDUFB5O43674 189 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 MATR3P43243 847 aaKnown RBP eCLIP9.53□□□□□ -0.88
TDP1-201ENST00000335725 ITGA7Q13683 1181 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
TDP1-201ENST00000335725 CARD9Q9H257 536 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 MRPL46Q9H2W6 279 aaKnown RBP9.53□□□□□ -0.88
TDP1-201ENST00000335725 ANO2Q9NQ90 1003 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 NOS1P29475 1434 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 NUP160Q12769 1436 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 BAG3O95817 575 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 PDGFRBP09619 1106 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 SP100P23497 879 aaPredicted RBP9.53□□□□□ -0.88
TDP1-201ENST00000335725 MDH1P40925 334 aaKnown RBP9.53□□□□□ -0.88
TDP1-201ENST00000335725 GUCY2FP51841 1108 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 MTTPP55157 894 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 ATP11AP98196 1134 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 LARP1BQ659C4 914 aaKnown RBP9.53□□□□□ -0.88
TDP1-201ENST00000335725 ANO7Q6IWH7 933 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 MYO1HQ8N1T3 1032 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 ANKRD44Q8N8A2 993 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 NOC3LQ8WTT2 800 aaKnown RBP9.53□□□□□ -0.88
TDP1-201ENST00000335725 HIC2Q96JB3 615 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 CATSPER2Q96P56 530 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 GBP5Q96PP8 586 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 NDST4Q9H3R1 872 aa9.53□□□□□ -0.88
TDP1-201ENST00000335725 DDX21Q9NR30 783 aaKnown RBP eCLIP9.53□□□□□ -0.88
TDP1-201ENST00000335725 ADGRL3Q9HAR2 1447 aa9.52□□□□□ -0.88
TDP1-201ENST00000335725 PZPP20742 1482 aa9.52□□□□□ -0.88
TDP1-201ENST00000335725 UGGT2Q9NYU1 1516 aa9.52□□□□□ -0.88
TDP1-201ENST00000335725 FANCCQ00597 558 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 PTK7Q13308 1070 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 IQCEQ6IPM2 695 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 CCDC83Q8IWF9 413 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 FBF1Q8TES7 1133 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 CCDC68Q9H2F9 335 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 PDS5BQ9NTI5 1447 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 CFTRP13569 1480 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 ITSN2Q9NZM3 1697 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 ACTN4O43707 911 aaKnown RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 GIGYF1O75420 1035 aaPredicted RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 ABL1P00519 1130 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 GSTT1P30711 240 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 LACTBP83111 547 aaPredicted RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 CKAP4Q07065 602 aaKnown RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 GLE1Q53GS7 698 aaKnown RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 GKAP1Q5VSY0 366 aaPredicted RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 TRIM68Q6AZZ1 485 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 UBE3BQ7Z3V4 1068 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 EXOC3L1Q86VI1 746 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 ARHGEF25Q86VW2 580 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 CTAGE1Q96RT6 745 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 SEC62Q99442 399 aaKnown RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 CFAP45Q9UL16 551 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 EFR3BQ9Y2G0 817 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 FANCAO15360 1455 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 HMGXB3Q12766 1538 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 GMNCA6NCL1 334 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 PPIP5K2O43314 1243 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 CCDC159P0C7I6 412 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 GBP1P32455 592 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 CSE1LP55060 971 aaKnown RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 KARSQ15046 597 aaKnown RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 TCERG1LQ5VWI1 586 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 ANKS4BQ8N8V4 417 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 CLIP3Q96DZ5 547 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 NAA15Q9BXJ9 866 aaKnown RBP9.52□□□□□ -0.89
TDP1-201ENST00000335725 NACAP1Q9BZK3 213 aa9.52□□□□□ -0.89
TDP1-201ENST00000335725 CCDC162PA2VCL2 907 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 HIP1RO75146 1068 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 TBCAO75347 108 aaKnown RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 IFIT2P09913 472 aaKnown RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 MYBL1P10243 752 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 UBASH3AP57075 661 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 EXOSC9Q06265 439 aaKnown RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 PKD2Q13563 968 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 BYSLQ13895 437 aaKnown RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 ZNF569Q5MCW4 686 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 ADALQ6DHV7 355 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 KLC3Q6P597 504 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 CCNI2Q6ZMN8 369 aaPredicted RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 SYT2Q8N9I0 419 aaPredicted RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 STKLD1Q8NE28 680 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 HOXC10Q9NYD6 342 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 C6orf203Q9P0P8 240 aaPredicted RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 CTTNBP2NLQ9P2B4 639 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 LRRC42Q9Y546 428 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 COMMD3-BMI1R4GMX3 469 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 CETN3O15182 167 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms