RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 PDCD2Q16342 344 aaPredicted RBP13.93□□□□□ -0.18
KPNA4-201ENST00000334256 RNF139Q8WU17 664 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 HVCN1Q96D96 273 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 CNOT7Q9UIV1 285 aaKnown RBP13.93□□□□□ -0.18
KPNA4-201ENST00000334256 CAPZA2P47755 286 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 ARHGAP44Q17R89 818 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 NFATC2IPQ8NCF5 419 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 PLCB1Q9NQ66 1216 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 AFF4Q9UHB7 1163 aaKnown RBP13.93□□□□□ -0.18
KPNA4-201ENST00000334256 IL2RBP14784 551 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 GNPTABQ3T906 1256 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 TBC1D8O95759 1140 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 MAP3K7CLP57077 242 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 WASHC5Q12768 1159 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 SCN4BQ8IWT1 228 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 GDAP1L1Q96MZ0 367 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 MRPL44Q9H9J2 332 aaKnown RBP13.93□□□□□ -0.18
KPNA4-201ENST00000334256 DCAF15Q66K64 600 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 CTAGE3PQ8IX95 158 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 CCDC61Q9Y6R9 512 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 SCAPERQ9BY12 1400 aa13.93□□□□□ -0.18
KPNA4-201ENST00000334256 TRPA1O75762 1119 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ATP2B4P23634 1241 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 SERPINB6P35237 376 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 TXKP42681 527 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 COPS6Q7L5N1 327 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 NBPF11Q86T75 865 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ZCWPW1Q9H0M4 648 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 G3BP2Q9UN86 482 aaKnown RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 DKC1O60832 514 aaKnown RBP eCLIP13.92□□□□□ -0.181e-323■■■■■ 170.7
KPNA4-201ENST00000334256 SLMAPQ14BN4 828 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 NUDT18Q6ZVK8 323 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 GCC1Q96CN9 775 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 PNMA5Q96PV4 448 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 FRMPD2Q68DX3 1309 aaPredicted RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 CCDC171Q6TFL3 1326 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 TTC1Q99614 292 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 RNF181Q9P0P0 153 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ZBTB8OSQ8IWT0 167 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 TRIML1Q8N9V2 468 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 RSAD2Q8WXG1 361 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 USP40Q9NVE5 1235 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 RMND1Q9NWS8 449 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.183e-6■■■■□ 23.8
KPNA4-201ENST00000334256 MCM5P33992 734 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 TNFAIP1Q13829 316 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ANKRD2Q9GZV1 360 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 FBXL5Q9UKA1 691 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ATF7P17544 494 aaPredicted RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 LIG4P49917 911 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 KHDRBS2Q5VWX1 349 aaKnown RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 NECAB1Q8N987 351 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 KRT2P35908 639 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 KCNA1Q09470 495 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 NME9Q86XW9 330 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ARHGAP18Q8N392 663 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 C1orf131Q8NDD1 294 aaKnown RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 XAGE3Q8WTP9 111 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 TGFBRAP1Q8WUH2 860 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ERLEC1Q96DZ1 483 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 SEPT9Q9UHD8 586 aaPredicted RBP13.92□□□□□ -0.18
KPNA4-201ENST00000334256 KCNH4Q9UQ05 1017 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 ZKSCAN5Q9Y2L8 839 aa13.92□□□□□ -0.18
KPNA4-201ENST00000334256 PRPF4O43172 522 aaKnown RBP eCLIP13.91□□□□□ -0.183e-6■■□□□ 12.3
KPNA4-201ENST00000334256 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 GTPBP10A4D1E9 387 aaKnown RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 TNNC2P02585 160 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 DSTYKQ6XUX3 929 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 FAM76AQ8TAV0 307 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 FAM149B1Q96BN6 582 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 SNX25Q9H3E2 840 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 MTUS1Q9ULD2 1270 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 C16orf72Q14CZ0 275 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 FMN1Q68DA7 1419 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 RNF10Q8N5U6 811 aaKnown RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 EXO5Q9H790 373 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 CYLC1P35663 651 aaPredicted RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 PRPSAP1Q14558 356 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 IRAK1BP1Q5VVH5 260 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 PBXIP1Q96AQ6 731 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 KRT27Q7Z3Y8 459 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 BBS5Q8N3I7 341 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 APPL2Q8NEU8 664 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 GNGT2O14610 69 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 SPTLC1O15269 473 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 TTBK2Q6IQ55 1244 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 SCUBE2Q9NQ36 999 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 TRIM75PA6NK02 468 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 DLATP10515 647 aaKnown RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 HIBADHP31937 336 aaKnown RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
KPNA4-201ENST00000334256 ARMCX5Q6P1M9 558 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 TCEANC2Q96MN5 208 aa13.91□□□□□ -0.18
KPNA4-201ENST00000334256 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms