RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 FESP07332 822 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 FOSBP53539 338 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 MKRN4PQ13434 485 aaPredicted RBP9.36□□□□□ -0.91
SKA2-201ENST00000330137 SLC5A9Q2M3M2 681 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
SKA2-201ENST00000330137 IFT20Q8IY31 132 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 WHAMMQ8TF30 809 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 ATP6V1G3Q96LB4 118 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 EYA1Q99502 592 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 NUCKS1Q9H1E3 243 aaKnown RBP9.36□□□□□ -0.91
SKA2-201ENST00000330137 EHD4Q9H223 541 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 CPDO75976 1380 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 GMNCA6NCL1 334 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 DDX58O95786 925 aaKnown RBP9.36□□□□□ -0.91
SKA2-201ENST00000330137 NAA25Q14CX7 972 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 IMMTQ16891 758 aaKnown RBP9.36□□□□□ -0.91
SKA2-201ENST00000330137 SKIDA1Q1XH10 827 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 TNNI3KQ59H18 835 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 RASSF8Q8NHQ8 419 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.36□□□□□ -0.91
SKA2-201ENST00000330137 WASF1Q92558 559 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 CUL5Q93034 780 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 CYFIP2Q96F07 1278 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 RNPC3Q96LT9 517 aaKnown RBP9.36□□□□□ -0.91
SKA2-201ENST00000330137 NUP58Q9BVL2 599 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 GPR108Q9NPR9 543 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
SKA2-201ENST00000330137 CHPF2Q9P2E5 772 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 GUCA1BQ9UMX6 200 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 TBC1D2BQ9UPU7 963 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 FPGT-TNNI3KV9GXZ4 949 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 NFAT5O94916 1531 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 A0A0U1RQJ8 604 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 HSPD1P10809 573 aaKnown RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 IFT88Q13099 833 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 ITGB3BPQ13352 177 aaPredicted RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 BIRC3Q13489 604 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 RILPL1Q5EBL4 403 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 CCDC122Q5T0U0 273 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 CFAP58Q5T655 872 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 ATRIPQ8WXE1 791 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 ARL8AQ96BM9 186 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 ZIM3Q96PE6 472 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 SPAG5Q96R06 1193 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 NUP88Q99567 741 aaPredicted RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 TSKSQ9UJT2 592 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 SNX12Q9UMY4 172 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 REXO2Q9Y3B8 237 aaKnown RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 PIK3C2AO00443 1686 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 ACTN4O43707 911 aaKnown RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 KRT9P35527 623 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 PAK2Q13177 524 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 TRIM29Q14134 588 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 MFN1Q8IWA4 741 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 TEX9Q8N6V9 391 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 MICAL1Q8TDZ2 1067 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 LMBR1Q8WVP7 490 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 NECTIN2Q92692 538 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 PAIP2Q9BPZ3 127 aaKnown RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 SLF1Q9BQI6 1058 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 GDF3Q9NR23 364 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 CAPN11Q9UMQ6 739 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 SH3BP1Q9Y3L3 701 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 SRPRBQ9Y5M8 271 aaKnown RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 MYH8P13535 1937 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 MYO5AQ9Y4I1 1855 aaKnown RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 TRAPPC3O43617 180 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 ATP6V1G2O95670 118 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 SCTRP47872 440 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 CCNG1P51959 295 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 TEFQ10587 303 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 KRT40Q6A162 431 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 CREG2Q8IUH2 290 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 MB21D2Q8IYB1 491 aaPredicted RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 KAZALD1Q96I82 304 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 ALG1Q9BT22 464 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 SLC24A3Q9HC58 644 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 RWDD2AQ9UIY3 292 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 DBNLQ9UJU6 430 aaKnown RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 FBXO2Q9UK22 296 aaPredicted RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 TRPC6Q9Y210 931 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.35□□□□□ -0.91
SKA2-201ENST00000330137 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 C15orf41Q9Y2V0 281 aa9.35□□□□□ -0.91
SKA2-201ENST00000330137 LMO7Q8WWI1 1683 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 HEG1Q9ULI3 1381 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 GOLGA6L10A0A0M3HER8 536 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 KLF18A0A0U1RQI7 1052 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 GOLGA8BA8MQT2 603 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 SMNDC1O75940 238 aaKnown RBP eCLIP9.34□□□□□ -0.91
SKA2-201ENST00000330137 ESCO1Q5FWF5 840 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 CAPRIN2Q6IMN6 1127 aaKnown RBP9.34□□□□□ -0.91
SKA2-201ENST00000330137 CACNA2D3Q8IZS8 1091 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 SPATA4Q8NEY3 305 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 NCOA7Q8NI08 942 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 ZFAND2BQ8WV99 257 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 CPLX3Q8WVH0 158 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 CENPTQ96BT3 561 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms