RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 HELBQ8NG08 1087 aaPredicted RBP18.86■□□□□ 0.61
SSH1-201ENST00000326470 BLZF1Q9H2G9 400 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 GUCA1BQ9UMX6 200 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 ATP2C1P98194 919 aaPredicted RBP18.86■□□□□ 0.61
SSH1-201ENST00000326470 HAUS4Q9H6D7 363 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 TNKSO95271 1327 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 PDE8AO60658 829 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 SLC5A1P13866 664 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 PPARAQ07869 468 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 TTC38Q5R3I4 469 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 NELFBQ8WX92 580 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 TNFRSF25Q93038 417 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 PYM1Q9BRP8 204 aaKnown RBP18.85■□□□□ 0.61
SSH1-201ENST00000326470 DOCK2Q92608 1830 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 GTPBP6O43824 516 aaPredicted RBP18.85■□□□□ 0.61
SSH1-201ENST00000326470 RNF40O75150 1001 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 PRDM1O75626 825 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 SYF2O95926 243 aaKnown RBP18.85■□□□□ 0.61
SSH1-201ENST00000326470 MAP9Q49MG5 647 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 PDXDC2PQ6P474 469 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 GOLGA6L1Q8N7Z2 621 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 ZFP91Q96JP5 570 aaPredicted RBP18.85■□□□□ 0.61
SSH1-201ENST00000326470 BRMS1Q9HCU9 246 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 TRIM10Q9UDY6 481 aa18.85■□□□□ 0.61
SSH1-201ENST00000326470 MAGEA9P43362 315 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 NOP2P46087 812 aaKnown RBP18.84■□□□□ 0.61
SSH1-201ENST00000326470 UBXN1Q04323 297 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 PTGDRQ13258 359 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 ZNF658Q5TYW1 1059 aaPredicted RBP18.84■□□□□ 0.61
SSH1-201ENST00000326470 MTRQ99707 1265 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 TRMT112Q9UI30 125 aaKnown RBP18.84■□□□□ 0.61
SSH1-201ENST00000326470 PRPF6O94906 941 aaKnown RBP18.84■□□□□ 0.61
SSH1-201ENST00000326470 STARD3NLO95772 234 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 PAPD7Q5XG87 772 aaKnown RBP18.84■□□□□ 0.61
SSH1-201ENST00000326470 OR8K1Q8NGG5 319 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 ESR2Q92731 530 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 SAR1BQ9Y6B6 198 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 V9GY48 417 aaPredicted RBP18.84■□□□□ 0.61
SSH1-201ENST00000326470 MYH6P13533 1939 aa18.84■□□□□ 0.61
SSH1-201ENST00000326470 TARSL2A2RTX5 802 aaKnown RBP18.83■□□□□ 0.61
SSH1-201ENST00000326470 NPY5RQ15761 445 aa18.83■□□□□ 0.61
SSH1-201ENST00000326470 AFAP1L1Q8TED9 768 aa18.83■□□□□ 0.61
SSH1-201ENST00000326470 RPGRIP1Q96KN7 1286 aa18.83■□□□□ 0.61
SSH1-201ENST00000326470 RMND1Q9NWS8 449 aa18.83■□□□□ 0.61
SSH1-201ENST00000326470 TMOD3Q9NYL9 352 aa18.83■□□□□ 0.61
SSH1-201ENST00000326470 MYH3P11055 1940 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 hCG_1642624A0A1W2PR95 340 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 TTC26A0AVF1 554 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 EIF3CLB5ME19 914 aaKnown RBP18.83■□□□□ 0.6
SSH1-201ENST00000326470 IL2RBP14784 551 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 CTR9Q6PD62 1173 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 MMS19Q96T76 1030 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 EIF3CQ99613 913 aaKnown RBP18.83■□□□□ 0.6
SSH1-201ENST00000326470 DNAJC7Q99615 494 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 HDAC6Q9UBN7 1215 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 HPCAL4Q9UM19 191 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 DISP2A7MBM2 1401 aa18.83■□□□□ 0.6
SSH1-201ENST00000326470 ARAP2Q8WZ64 1704 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 H7C1D1 291 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 ENC1O14682 589 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 ZNF662Q6ZS27 426 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 RBM28Q9NW13 759 aaKnown RBP18.82■□□□□ 0.6
SSH1-201ENST00000326470 ANAPC4Q9UJX5 808 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 IQSEC3Q9UPP2 1182 aaPredicted RBP18.82■□□□□ 0.6
SSH1-201ENST00000326470 ZC3H4Q9UPT8 1303 aaKnown RBP18.82■□□□□ 0.6
SSH1-201ENST00000326470 BCORQ6W2J9 1755 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 A0A1W2PQC6 194 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 ATP1A1P05023 1023 aaKnown RBP18.82■□□□□ 0.6
SSH1-201ENST00000326470 ENAHQ8N8S7 591 aaPredicted RBP18.82■□□□□ 0.6
SSH1-201ENST00000326470 MIGA1Q8NAN2 632 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 LUC7L2Q9Y383 392 aaKnown RBP18.82■□□□□ 0.6
SSH1-201ENST00000326470 LRP5O75197 1615 aa18.82■□□□□ 0.6
SSH1-201ENST00000326470 PPFIA4O75335 1185 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 PLEKHA8P1O95397 391 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 CORO7P57737 925 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 HERVK_113P62684 666 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 IRF2BP1Q8IU81 584 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 MB21D1Q8N884 522 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 COG1Q8WTW3 980 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 MINDY4BA8MYZ0 360 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 SNAP23O00161 211 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 RPN1P04843 607 aaKnown RBP18.81■□□□□ 0.6
SSH1-201ENST00000326470 PARP1P09874 1014 aaKnown RBP18.81■□□□□ 0.6
SSH1-201ENST00000326470 CKAP4Q07065 602 aaKnown RBP18.81■□□□□ 0.6
SSH1-201ENST00000326470 CCDC122Q5T0U0 273 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 CATIPQ7Z7H3 387 aa18.81■□□□□ 0.6
SSH1-201ENST00000326470 ZSCAN10Q96SZ4 725 aaPredicted RBP18.81■□□□□ 0.6
SSH1-201ENST00000326470 LGALS16A8MUM7 142 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 PRCPP42785 496 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 WDR59Q6PJI9 974 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 EHBP1Q8NDI1 1231 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
SSH1-201ENST00000326470 ASAP1Q9ULH1 1129 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 CAPN11Q9UMQ6 739 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 NHSL1Q5SYE7 1610 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 TRAPPC10P48553 1259 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 KRT83P78385 493 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 IL17AQ16552 155 aa18.8■□□□□ 0.6
SSH1-201ENST00000326470 TSR1Q2NL82 804 aaKnown RBP18.8■□□□□ 0.6
SSH1-201ENST00000326470 GDAQ9Y2T3 454 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms