RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 NR5A1Q13285 461 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 SNW1Q13573 536 aaKnown RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 TRIM29Q14134 588 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 NPY5RQ15761 445 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 CAMK4Q16566 473 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 CC2D2BQ6DHV5 1058 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 RBM43Q6ZSC3 357 aaKnown RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 CCAR1Q8IX12 1150 aaKnown RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 ENGASEQ8NFI3 743 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 NEDD1Q8NHV4 660 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 ZNF526Q8TF50 670 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 ZDHHC15Q96MV8 337 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 TMEM47Q9BQJ4 181 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 NUP62CLQ9H1M0 184 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 CLSTN2Q9H4D0 955 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 KAT14Q9H8E8 782 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 NOVP48745 357 aa14.92□□□□□ -0.02
CPNE1-201ENST00000317677 GRM4Q14833 912 aa14.92□□□□□ -0.02
CPNE1-201ENST00000317677 STK38Q15208 465 aa14.92□□□□□ -0.02
CPNE1-201ENST00000317677 C9orf131Q5VYM1 1079 aa14.92□□□□□ -0.02
CPNE1-201ENST00000317677 CTCFLQ8NI51 663 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-201ENST00000317677 OSBPL5Q9H0X9 879 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-201ENST00000317677 DDX19AQ9NUU7 478 aaKnown RBP14.92□□□□□ -0.02
CPNE1-201ENST00000317677 MAD2L2Q9UI95 211 aa14.92□□□□□ -0.02
CPNE1-201ENST00000317677 ERICH4A6NGS2 130 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 ADAMTS3O15072 1205 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 SPTLC2O15270 562 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 PPIP5K2O43314 1243 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 ME1P48163 572 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 CACNB3P54284 484 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 C1QTNF8P60827 252 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 SF3A1Q15459 793 aaKnown RBP14.91□□□□□ -0.02
CPNE1-201ENST00000317677 NOSTRINQ8IVI9 506 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 PHF20Q9BVI0 1012 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 MRIQ9BWK5 157 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 RASSF4Q9H2L5 321 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 PLIN4Q96Q06 1357 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 FAM205CA6NFA0 338 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 AP5Z1O43299 807 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 TNNT3P45378 269 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-201ENST00000317677 SLC39A14Q15043 492 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 EARS2Q5JPH6 523 aaKnown RBP14.91□□□□□ -0.02
CPNE1-201ENST00000317677 CEP95Q96GE4 821 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
CPNE1-201ENST00000317677 AKR1B1P15121 316 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 SHMT1P34896 483 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 SOGA3Q5TF21 947 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 FSIP1Q8NA03 581 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 KCNG4Q8TDN1 519 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 FOXP1Q9H334 677 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-201ENST00000317677 RNF181Q9P0P0 153 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 FAM198AQ9UFP1 575 aa14.9□□□□□ -0.02
CPNE1-201ENST00000317677 IGKV6D-41A0A0C4DH26 115 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 A0A1W2PQ27 194 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 A0A1W2PQ64 194 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 A0A1W2PQD8 194 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 CYTH3O43739 400 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 HDLBPQ00341 1268 aaKnown RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 CCDC178Q5BJE1 867 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 NOM1Q5C9Z4 860 aaKnown RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 SH3BP5LQ7L8J4 393 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 CKAP2LQ8IYA6 745 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 SUPT20HQ8NEM7 779 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 TNFRSF25Q93038 417 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 DNAJC18Q9H819 358 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 BRMS1Q9HCU9 246 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 STX8Q9UNK0 236 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 PALM3A6NDB9 673 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 MARCKSP29966 332 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 GNL2Q13823 731 aaKnown RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 MAP3K11Q16584 847 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 CLEC10AQ8IUN9 316 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 FMR1NBQ8N0W7 255 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 TXLNBQ8N3L3 684 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 PSMD1Q99460 953 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 TNMDQ9H2S6 317 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
CPNE1-201ENST00000317677 ZNF277Q9NRM2 450 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-201ENST00000317677 FER1L6Q2WGJ9 1857 aa14.88□□□□□ -0.03
CPNE1-201ENST00000317677 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
CPNE1-201ENST00000317677 LMNB1P20700 586 aa14.88□□□□□ -0.03
CPNE1-201ENST00000317677 AKAP17AQ02040 695 aaKnown RBP14.88□□□□□ -0.03
CPNE1-201ENST00000317677 NAA30Q147X3 362 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-201ENST00000317677 PFKFB3Q16875 520 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-201ENST00000317677 MRPS27Q92552 414 aaKnown RBP14.88□□□□□ -0.03
CPNE1-201ENST00000317677 RSPH14Q9UHP6 348 aa14.88□□□□□ -0.03
CPNE1-201ENST00000317677 MTMR7Q9Y216 660 aa14.88□□□□□ -0.03
CPNE1-201ENST00000317677 DDTLA6NHG4 134 aaPredicted RBP14.87□□□□□ -0.03
CPNE1-201ENST00000317677 WNT7AO00755 349 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 GOLGA8HP0CJ92 632 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 SCG2P13521 617 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 KIF5BP33176 963 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 NDUFA8P51970 172 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 FAM160A1Q05DH4 1040 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 SAFBQ15424 915 aaKnown RBP eCLIP14.87□□□□□ -0.031e-17■■■■□ 20.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms