RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 USP17L17D6RBQ6 530 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L19D6RCP7 530 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L20D6RJB6 530 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 PPP1R12BO60237 982 aaPredicted RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 SPDYE6P0CI01 402 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 MYCLP12524 364 aaPredicted RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L24Q0WX57 530 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 SCRN1Q12765 414 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 UBE3CQ15386 1083 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 RTN1Q16799 776 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L6PQ6QN14 398 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 SLF2Q8IX21 1173 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 ENAHQ8N8S7 591 aaPredicted RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 ZIC5Q96T25 663 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 KLRF2D3W0D1 207 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 FOXP2O15409 715 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 RPS6KB1P23443 525 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 ME1P48163 572 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 UTP14CQ5TAP6 766 aaKnown RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 CYP4F22Q6NT55 531 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 CPLX2Q6PUV4 134 aaKnown RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 CDC37L1Q7L3B6 337 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 SLC10A4Q96EP9 437 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 ALG1Q9BT22 464 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 HELLSQ9NRZ9 838 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 CNPY2Q9Y2B0 182 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 PLEKHG2Q9H7P9 1386 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 BTBD18B2RXH4 712 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 USP17L10C9JJH3 530 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 ZNF157P51786 506 aaPredicted RBP5.69□□□□□ -1.5
CAST-201ENST00000309190 ZNF174Q15697 407 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 SH3BP5LQ7L8J4 393 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 ZNF654Q8IZM8 581 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 C8orf76Q96K31 380 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 PIGSQ96S52 555 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 ALDH8A1Q9H2A2 487 aaPredicted RBP5.69□□□□□ -1.5
CAST-201ENST00000309190 RAVER2Q9HCJ3 691 aaKnown RBP5.69□□□□□ -1.5
CAST-201ENST00000309190 CSADQ9Y600 493 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 ANTXR2P58335 489 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 RHBDL3P58872 404 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 CKAP2LQ8IYA6 745 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 EYSQ5T1H1 3165 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 MCM7P33993 719 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 NF2P35240 595 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 NCAPG2Q86XI2 1143 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 MYRIPQ8NFW9 859 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 POM121Q96HA1 1249 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 GBP4Q96PP9 640 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 TMEM47Q9BQJ4 181 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 NBPF3Q9H094 633 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 OSBPL5Q9H0X9 879 aaPredicted RBP5.69□□□□□ -1.5
CAST-201ENST00000309190 GPRC5DQ9NZD1 345 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 MED23Q9ULK4 1368 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 MYH3P11055 1940 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 MYH13Q9UKX3 1938 aa5.69□□□□□ -1.5
CAST-201ENST00000309190 TCRBV5S4A2TA0A5A2 114 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 PES1O00541 588 aaKnown RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 TRPA1O75762 1119 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 CAPN15O75808 1086 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 SYT1P21579 422 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 CNGA1P29973 690 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 ZNF76P36508 570 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 NAPAP54920 295 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 PTPN21Q16825 1174 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 LETM2Q2VYF4 491 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 Q3C1V9 767 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 SLFN13Q68D06 897 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 CAVIN1Q6NZI2 390 aaKnown RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 ZSCAN10Q96SZ4 725 aaPredicted RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.68□□□□□ -1.57e-7■■■■■ 104.8
CAST-201ENST00000309190 PI4KBQ9UBF8 816 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 SAMM50Q9Y512 469 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 COL1A1P02452 1464 aaPredicted RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 A0A1W2PRG0 241 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 F5H6K3 240 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 KLRC3Q07444 240 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 PIK3AP1Q6ZUJ8 805 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 TRIM22Q8IYM9 498 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 ZNF784Q8NCA9 323 aaPredicted RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 OXER1Q8TDS5 423 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 PKNOX2Q96KN3 472 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 GPR108Q9NPR9 543 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 TMEM260Q9NX78 707 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 DYNC1I1O14576 645 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 IRF6O14896 467 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 ADAMTS3O15072 1205 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 CALM1P0DP23 149 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 CALM2P0DP24 149 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 CALM3P0DP25 149 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 PDIA3P30101 505 aaKnown RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 HOXD11P31277 338 aaPredicted RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 NUCB2P80303 420 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 TOB2Q14106 344 aaPredicted RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 C12orf60Q5U649 245 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 APOA5Q6Q788 366 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 SMAP1Q8IYB5 467 aaPredicted RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 GRIN3BO60391 1043 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 GADD45BO75293 160 aaPredicted RBP5.68□□□□□ -1.5
CAST-201ENST00000309190 ZMYND10O75800 440 aa5.68□□□□□ -1.5
CAST-201ENST00000309190 HMGN5P82970 282 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms