RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 FLRT1Q9NZU1 646 aa21.74■■□□□ 1.07
TMEM88-201ENST00000301599 CLIP2Q9UDT6 1046 aa21.74■■□□□ 1.07
TMEM88-201ENST00000301599 COLQQ9Y215 455 aaPredicted RBP21.74■■□□□ 1.07
TMEM88-201ENST00000301599 F5H6K3 240 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 PRDM1O75626 825 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 ADORA2AP29274 412 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 KLRC3Q07444 240 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 FAM83BQ5T0W9 1011 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 TICAM2Q86XR7 235 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 ABRAQ8N0Z2 381 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 DIS3LQ8TF46 1054 aaKnown RBP21.73■■□□□ 1.07
TMEM88-201ENST00000301599 MKL1Q969V6 931 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 FBXO28Q9NVF7 368 aa21.73■■□□□ 1.07
TMEM88-201ENST00000301599 PPARAQ07869 468 aa21.72■■□□□ 1.07
TMEM88-201ENST00000301599 TMEM132BQ14DG7 1078 aa21.72■■□□□ 1.07
TMEM88-201ENST00000301599 LHX8Q68G74 356 aa21.72■■□□□ 1.07
TMEM88-201ENST00000301599 HELLSQ9NRZ9 838 aa21.72■■□□□ 1.07
TMEM88-201ENST00000301599 PPP1R9AQ9ULJ8 1098 aa21.72■■□□□ 1.07
TMEM88-201ENST00000301599 IGKV6D-41A0A0C4DH26 115 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 VWA5AO00534 786 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 FCER1AP12319 257 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 STAT3P40763 770 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 MNX1P50219 401 aaPredicted RBP21.71■■□□□ 1.07
TMEM88-201ENST00000301599 OLFML2BQ68BL8 750 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 SMC5Q8IY18 1101 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 NEDD1Q8NHV4 660 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 C11orf49Q9H6J7 331 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 MTMR4Q9NYA4 1195 aa21.71■■□□□ 1.07
TMEM88-201ENST00000301599 COBLO75128 1261 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 TTLL1O95922 423 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 TSPY3P0CV98 308 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 TSPY8P0CW00 308 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 CNGA1P29973 690 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 CYP2C19P33261 490 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 RIOX2Q8IUF8 465 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 SLF1Q9BQI6 1058 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 LNPKQ9C0E8 428 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 SYNPO2Q9UMS6 1093 aa21.7■■□□□ 1.06
TMEM88-201ENST00000301599 CEP290O15078 2479 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 RLFQ13129 1914 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 MSCO60682 206 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 NDUFB10O96000 172 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 IGHA2P01877 340 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 COPB2P35606 906 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 TFAP4Q01664 338 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 B4GALNT3Q6L9W6 998 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 CCDC129Q6ZRS4 1044 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 PRPF38AQ8NAV1 312 aaKnown RBP21.69■■□□□ 1.06
TMEM88-201ENST00000301599 CEP95Q96GE4 821 aa21.69■■□□□ 1.06
TMEM88-201ENST00000301599 NUP88Q99567 741 aaPredicted RBP21.69■■□□□ 1.06
TMEM88-201ENST00000301599 CHRDL2Q6WN34 429 aa21.68■■□□□ 1.06
TMEM88-201ENST00000301599 EXOC6Q8TAG9 804 aa21.68■■□□□ 1.06
TMEM88-201ENST00000301599 DDX20Q9UHI6 824 aaKnown RBP21.68■■□□□ 1.06
TMEM88-201ENST00000301599 ALX1Q15699 326 aa21.67■■□□□ 1.06
TMEM88-201ENST00000301599 MCMDC2Q4G0Z9 681 aa21.67■■□□□ 1.06
TMEM88-201ENST00000301599 FAM47AQ5JRC9 791 aa21.67■■□□□ 1.06
TMEM88-201ENST00000301599 PPP4R3BQ5MIZ7 849 aa21.67■■□□□ 1.06
TMEM88-201ENST00000301599 MMP19Q99542 508 aa21.67■■□□□ 1.06
TMEM88-201ENST00000301599 CTDP1Q9Y5B0 961 aaPredicted RBP21.67■■□□□ 1.06
TMEM88-201ENST00000301599 TRIM6-TRIM34B2RNG4 842 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 ZBED4O75132 1171 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 IGHDP01880 384 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 KCTD2Q14681 263 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 CHD1LQ86WJ1 897 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 GMCL1P1Q8NEA9 526 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 REPS2Q8NFH8 660 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 ANAPC4Q9UJX5 808 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 FEM1BQ9UK73 627 aa21.66■■□□□ 1.06
TMEM88-201ENST00000301599 ZNF214Q9UL59 606 aaPredicted RBP21.66■■□□□ 1.06
TMEM88-201ENST00000301599 FOXP2O15409 715 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 COL6A1P12109 1028 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 CYBAP13498 195 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 NUCB1Q02818 461 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 CTDSPL2Q05D32 466 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 VPS53Q5VIR6 699 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 SLFN13Q68D06 897 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 TRPV1Q8NER1 839 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 TEX13BQ9BXU2 312 aa21.65■■□□□ 1.06
TMEM88-201ENST00000301599 DIS3Q9Y2L1 958 aaKnown RBP21.65■■□□□ 1.06
TMEM88-201ENST00000301599 RILPL2Q969X0 211 aa21.64■■□□□ 1.05
TMEM88-201ENST00000301599 MAML3Q96JK9 1138 aa21.64■■□□□ 1.05
TMEM88-201ENST00000301599 FAM227BQ96M60 508 aa21.64■■□□□ 1.05
TMEM88-201ENST00000301599 RBM27Q9P2N5 1060 aaKnown RBP21.64■■□□□ 1.05
TMEM88-201ENST00000301599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.64■■□□□ 1.05
TMEM88-201ENST00000301599 GREB1LQ9C091 1923 aaPredicted RBP21.64■■□□□ 1.05
TMEM88-201ENST00000301599 A0A0G2JMZ2 1700 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 PLIN4Q96Q06 1357 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 TSPY2A6NKD2 308 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 ATP2A1O14983 1001 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 FGAP02671 866 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 BMP3P12645 472 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 SNRNP48Q6IEG0 339 aaKnown RBP21.63■■□□□ 1.05
TMEM88-201ENST00000301599 PLEKHM2Q8IWE5 1019 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 C7orf61Q8IZ16 206 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 LRRC47Q8N1G4 583 aaKnown RBP21.63■■□□□ 1.05
TMEM88-201ENST00000301599 ARRDC4Q8NCT1 418 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 KIFC2Q96AC6 838 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 OSBPL3Q9H4L5 887 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 INCENPQ9NQS7 918 aa21.63■■□□□ 1.05
TMEM88-201ENST00000301599 PFASO15067 1338 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms