RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 EPN1Q9Y6I3 576 aaPredicted RBP18.23■□□□□ 0.51
SNAPC4-201ENST00000298532 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
SNAPC4-201ENST00000298532 CCDC105Q8IYK2 499 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 TCHPQ9BT92 498 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 KAT6BQ8WYB5 2073 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 NONOQ15233 471 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 KRT25Q7Z3Z0 450 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 TACO1Q9BSH4 297 aaKnown RBP18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 RTEL1Q9NZ71 1219 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 SNCBQ16143 134 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 SPATA31A3Q5VYP0 1347 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 H7C1D1 291 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 LDHBP07195 334 aaKnown RBP18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 CLCN6P51797 869 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 CCDC14Q49A88 953 aa18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 RAB3IPQ96QF0 476 aaPredicted RBP18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.22■□□□□ 0.51
SNAPC4-201ENST00000298532 PICALMQ13492 652 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 GCKRQ14397 625 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 KLHL14Q9P2G3 628 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 STX2P32856 288 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 PLS1Q14651 629 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 TERF2Q15554 542 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 HERC4Q5GLZ8 1057 aaPredicted RBP18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 EFCC1Q9HA90 598 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 STK38LQ9Y2H1 464 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 CDC42BPAQ5VT25 1732 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 PUM3Q15397 648 aaKnown RBP18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 CABP7Q86V35 215 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 CCDC170Q8IYT3 715 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 NLRC4Q9NPP4 1024 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 FAN1Q9Y2M0 1017 aa18.21■□□□□ 0.51
SNAPC4-201ENST00000298532 RASEFQ8IZ41 740 aa18.21■□□□□ 0.5
SNAPC4-201ENST00000298532 SNX29Q8TEQ0 813 aa18.21■□□□□ 0.5
SNAPC4-201ENST00000298532 FAM184BQ9ULE4 1060 aa18.21■□□□□ 0.5
SNAPC4-201ENST00000298532 GLI2P10070 1586 aa18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 SF3A3Q12874 501 aaKnown RBP eCLIP18.2■□□□□ 0.51e-8■■■■■ 43.2
SNAPC4-201ENST00000298532 ZNF827Q17R98 1081 aa18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 ANKRD20A3Q5VUR7 823 aa18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 KRT15P19012 456 aa18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 TPD52P55327 224 aaPredicted RBP18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 AMFRQ9UKV5 643 aa18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 HSPA1LP34931 641 aa18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 DPP8Q6V1X1 898 aaPredicted RBP18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 C11orf57Q6ZUT1 292 aaPredicted RBP18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 SLC35F6Q8N357 371 aa18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 MRRFQ96E11 262 aaKnown RBP18.2■□□□□ 0.5
SNAPC4-201ENST00000298532 AGLP35573 1532 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 KRT5P13647 590 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 FBXO38Q6PIJ6 1188 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 GPIHBP1Q8IV16 184 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 DDX23Q9BUQ8 820 aaKnown RBP18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 PLEKHA4Q9H4M7 779 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 UFL1O94874 794 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 LIN9Q5TKA1 542 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 DYMQ7RTS9 669 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 MAP4K1Q92918 833 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 VEZTQ9HBM0 779 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 IQGAP3Q86VI3 1631 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 SH3BGRP55822 239 aaPredicted RBP18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 SDCCAG8Q86SQ7 713 aaPredicted RBP18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 CNKSR1Q969H4 720 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 GBP5Q96PP8 586 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 MAK16Q9BXY0 300 aaKnown RBP18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 VPS54Q9P1Q0 977 aa18.19■□□□□ 0.5
SNAPC4-201ENST00000298532 KCNK3O14649 394 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 FBXO18Q8NFZ0 1043 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 MAIP1Q8WWC4 291 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 GNA14O95837 355 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 GAS8O95995 478 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 ITGA6P23229 1130 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 CTDSPL2Q05D32 466 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 MUM1Q2TAK8 710 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 WDR44Q5JSH3 913 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 AGTPBP1Q9UPW5 1226 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 JRKLQ9Y4A0 524 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 JCADQ9P266 1359 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 KRIT1O00522 736 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 NDC80O14777 642 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 CASQ2O14958 399 aaPredicted RBP18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 PHLDB3Q6NSJ2 640 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 LARGE2Q8N3Y3 721 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 ANKRD42Q8N9B4 389 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 EAF2Q96CJ1 260 aaPredicted RBP18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 TBC1D31Q96DN5 1066 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 PCDHA5Q9Y5H7 936 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 LUC7L3O95232 432 aaKnown RBP18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 DPCR1Q3MIW9 517 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 RPAINQ86UA6 219 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 FAM89AQ96GI7 184 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 ZNF496Q96IT1 587 aaPredicted RBP18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 GLT8D2Q9H1C3 349 aa18.18■□□□□ 0.5
SNAPC4-201ENST00000298532 PABPN1LA6NDY0 278 aaKnown RBP18.17■□□□□ 0.5
SNAPC4-201ENST00000298532 PRDM1O75626 825 aa18.17■□□□□ 0.5
SNAPC4-201ENST00000298532 HNRNPH2P55795 449 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms