RNA–Protein interactions for RNA: ENST00000294613.9

TM2D1-201, Transcript of TM2 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM2D1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-201ENST00000294613 NEDD1Q8NHV4 660 aa20.53■□□□□ 0.88
TM2D1-201ENST00000294613 U2AF1L4Q8WU68 220 aaKnown RBP20.53■□□□□ 0.88
TM2D1-201ENST00000294613 SPATC1LQ9H0A9 340 aa20.53■□□□□ 0.88
TM2D1-201ENST00000294613 ZNF287Q9HBT7 754 aa20.53■□□□□ 0.88
TM2D1-201ENST00000294613 MTMR4Q9NYA4 1195 aa20.53■□□□□ 0.88
TM2D1-201ENST00000294613 ANAPC4Q9UJX5 808 aa20.53■□□□□ 0.88
TM2D1-201ENST00000294613 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
TM2D1-201ENST00000294613 LCTP09848 1927 aa20.53■□□□□ 0.88
TM2D1-201ENST00000294613 RAD21O60216 631 aa20.52■□□□□ 0.88
TM2D1-201ENST00000294613 HSPD1P10809 573 aaKnown RBP20.52■□□□□ 0.88
TM2D1-201ENST00000294613 XRCC5P13010 732 aaKnown RBP20.52■□□□□ 0.88
TM2D1-201ENST00000294613 PDE4BQ07343 736 aa20.52■□□□□ 0.88
TM2D1-201ENST00000294613 MAP3K21Q5TCX8 1036 aa20.52■□□□□ 0.88
TM2D1-201ENST00000294613 WDR78Q5VTH9 848 aa20.52■□□□□ 0.88
TM2D1-201ENST00000294613 SAMD1Q6SPF0 538 aaPredicted RBP20.52■□□□□ 0.88
TM2D1-201ENST00000294613 ZNF444Q8N0Y2 327 aaPredicted RBP20.52■□□□□ 0.88
TM2D1-201ENST00000294613 MB21D1Q8N884 522 aa20.52■□□□□ 0.88
TM2D1-201ENST00000294613 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.52■□□□□ 0.88
TM2D1-201ENST00000294613 HOXC10Q9NYD6 342 aa20.52■□□□□ 0.88
TM2D1-201ENST00000294613 ADAMTS5Q9UNA0 930 aa20.52■□□□□ 0.88
TM2D1-201ENST00000294613 FGAP02671 866 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 TSPY3P0CV98 308 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 TSPY8P0CW00 308 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 ZKSCAN1P17029 563 aaPredicted RBP20.51■□□□□ 0.87
TM2D1-201ENST00000294613 PTPREP23469 700 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 RGS2P41220 211 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 MAP2K5Q13163 448 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 TMEM132BQ14DG7 1078 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 RASGRP2Q7LDG7 609 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 CCAR1Q8IX12 1150 aaKnown RBP20.51■□□□□ 0.87
TM2D1-201ENST00000294613 REPS2Q8NFH8 660 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 DEFB118Q96PH6 123 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 IL25Q9H293 177 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 FLRT1Q9NZU1 646 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 CLIP2Q9UDT6 1046 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 PPP1R9AQ9ULJ8 1098 aa20.51■□□□□ 0.87
TM2D1-201ENST00000294613 RANBP2P49792 3224 aaKnown RBP20.51■□□□□ 0.87
TM2D1-201ENST00000294613 LRRC37A2A6NM11 1700 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 SLC15A5A6NIM6 579 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 F5H6K3 240 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 ORC4O43929 436 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 NMT2O60551 498 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 TTLL1O95922 423 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 SLC3A2P08195 630 aaKnown RBP20.5■□□□□ 0.87
TM2D1-201ENST00000294613 PRKAR2AP13861 404 aaKnown RBP20.5■□□□□ 0.87
TM2D1-201ENST00000294613 ERCC3P19447 782 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 TFAP4Q01664 338 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 KLRC3Q07444 240 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 TBC1D10CQ8IV04 446 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 SHCBP1Q8NEM2 672 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 NKX2-3Q8TAU0 364 aa20.5■□□□□ 0.87
TM2D1-201ENST00000294613 CWC22Q9HCG8 908 aaKnown RBP20.5■□□□□ 0.87
TM2D1-201ENST00000294613 ZNF214Q9UL59 606 aaPredicted RBP20.5■□□□□ 0.87
TM2D1-201ENST00000294613 VWA5AO00534 786 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 FGRP09769 529 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 TTC22Q5TAA0 569 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 PRPF38BQ5VTL8 546 aaKnown RBP20.49■□□□□ 0.87
TM2D1-201ENST00000294613 GMCL1P1Q8NEA9 526 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 MKL1Q969V6 931 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 CRISPLD2Q9H0B8 497 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 IL17RBQ9NRM6 502 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 SYNPO2Q9UMS6 1093 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 DNAH12Q6ZR08 3092 aa20.49■□□□□ 0.87
TM2D1-201ENST00000294613 SGPL1O95470 568 aa20.48■□□□□ 0.87
TM2D1-201ENST00000294613 IGHA2P01877 340 aa20.48■□□□□ 0.87
TM2D1-201ENST00000294613 HOXC6P09630 235 aa20.48■□□□□ 0.87
TM2D1-201ENST00000294613 HAND2P61296 217 aa20.48■□□□□ 0.87
TM2D1-201ENST00000294613 PLS1Q14651 629 aa20.48■□□□□ 0.87
TM2D1-201ENST00000294613 CWC27Q6UX04 472 aaKnown RBP20.48■□□□□ 0.87
TM2D1-201ENST00000294613 NPLOC4Q8TAT6 608 aa20.48■□□□□ 0.87
TM2D1-201ENST00000294613 SLF1Q9BQI6 1058 aa20.48■□□□□ 0.87
TM2D1-201ENST00000294613 DIAPH3Q9NSV4 1193 aa20.48■□□□□ 0.87
TM2D1-201ENST00000294613 FARP2O94887 1054 aaPredicted RBP20.47■□□□□ 0.87
TM2D1-201ENST00000294613 ADORA2AP29274 412 aa20.47■□□□□ 0.87
TM2D1-201ENST00000294613 CACNB2Q08289 660 aaPredicted RBP20.47■□□□□ 0.87
TM2D1-201ENST00000294613 IVNS1ABPQ9Y6Y0 642 aa20.47■□□□□ 0.87
TM2D1-201ENST00000294613 NEDD4P46934 1319 aa20.47■□□□□ 0.87
TM2D1-201ENST00000294613 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
TM2D1-201ENST00000294613 TSPY2A6NKD2 308 aa20.46■□□□□ 0.87
TM2D1-201ENST00000294613 CCND3P30281 292 aaPredicted RBP20.46■□□□□ 0.87
TM2D1-201ENST00000294613 NOVP48745 357 aa20.46■□□□□ 0.87
TM2D1-201ENST00000294613 NCAPG2Q86XI2 1143 aa20.46■□□□□ 0.87
TM2D1-201ENST00000294613 HMX1Q9NP08 348 aaPredicted RBP20.46■□□□□ 0.87
TM2D1-201ENST00000294613 MYH6P13533 1939 aa20.45■□□□□ 0.86
TM2D1-201ENST00000294613 RANBP6O60518 1105 aaKnown RBP20.45■□□□□ 0.86
TM2D1-201ENST00000294613 RIOX2Q8IUF8 465 aa20.45■□□□□ 0.86
TM2D1-201ENST00000294613 TRMT44Q8IYL2 757 aaKnown RBP20.45■□□□□ 0.86
TM2D1-201ENST00000294613 DIS3LQ8TF46 1054 aaKnown RBP20.45■□□□□ 0.86
TM2D1-201ENST00000294613 COBLO75128 1261 aa20.44■□□□□ 0.86
TM2D1-201ENST00000294613 MNX1P50219 401 aaPredicted RBP20.44■□□□□ 0.86
TM2D1-201ENST00000294613 SLFN13Q68D06 897 aa20.44■□□□□ 0.86
TM2D1-201ENST00000294613 STAG1Q8WVM7 1258 aa20.44■□□□□ 0.86
TM2D1-201ENST00000294613 MROH8Q9H579 483 aa20.44■□□□□ 0.86
TM2D1-201ENST00000294613 STX8Q9UNK0 236 aa20.44■□□□□ 0.86
TM2D1-201ENST00000294613 MFAP1P55081 439 aaKnown RBP20.43■□□□□ 0.86
TM2D1-201ENST00000294613 RRP12Q5JTH9 1297 aaKnown RBP20.43■□□□□ 0.86
TM2D1-201ENST00000294613 CHMP4CQ96CF2 233 aa20.43■□□□□ 0.86
TM2D1-201ENST00000294613 GMCL1Q96IK5 515 aa20.43■□□□□ 0.86
TM2D1-201ENST00000294613 TRIOBPQ9H2D6 2365 aa20.43■□□□□ 0.86
TM2D1-201ENST00000294613 HIP1O00291 1037 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 277.4 ms