RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PDE4DQ08499 809 aa13.39□□□□□ -0.27
SLC13A3-201ENST00000279027 PAK1Q13153 545 aa13.39□□□□□ -0.27
SLC13A3-201ENST00000279027 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
SLC13A3-201ENST00000279027 SEC23AQ15436 765 aa13.39□□□□□ -0.27
SLC13A3-201ENST00000279027 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.39□□□□□ -0.27
SLC13A3-201ENST00000279027 ZNHIT6Q9NWK9 470 aaKnown RBP13.39□□□□□ -0.27
SLC13A3-201ENST00000279027 TBC1D7Q9P0N9 293 aa13.39□□□□□ -0.27
SLC13A3-201ENST00000279027 TTF2Q9UNY4 1162 aaKnown RBP13.39□□□□□ -0.27
SLC13A3-201ENST00000279027 CCDC175P0C221 793 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 ETF1P62495 437 aaKnown RBP13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 RBL2Q08999 1139 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 WWC2Q6AWC2 1192 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 CALML4Q96GE6 196 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 RBM17Q96I25 401 aaKnown RBP13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 PIGSQ96S52 555 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 SRRTQ9BXP5 876 aaKnown RBP13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 ARHGAP6O43182 974 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 KRT9P35527 623 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 GPSM2P81274 684 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 PDE4CQ08493 712 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 TOGARAM2Q6ZUX3 1019 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 TMEM47Q9BQJ4 181 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 PPP1R1BQ9UD71 204 aaPredicted RBP13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 XDHP47989 1333 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 GRAPQ13588 217 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 PKN1Q16512 942 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 GRAPLQ8TC17 118 aaPredicted RBP13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 ERO1AQ96HE7 468 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 HPSEQ9Y251 543 aa13.38□□□□□ -0.27
SLC13A3-201ENST00000279027 HINFPQ9BQA5 517 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 A0A087X0B3 334 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 PSMA7O14818 248 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 BMP6P22004 513 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 CDK8P49336 464 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 SPATA1Q5VX52 437 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 SEPT12Q8IYM1 358 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 PHF20Q9BVI0 1012 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 CD209Q9NNX6 404 aa13.37□□□□□ -0.27
SLC13A3-201ENST00000279027 RHOXF2BP0C7M4 288 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 MORC3Q14149 939 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 CABP7Q86V35 215 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 RHOXF2Q9BQY4 288 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 USP40Q9NVE5 1235 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 RPN1P04843 607 aaKnown RBP13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 SLURP2P0DP57 97 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 EPS15P42566 896 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 ENOX1Q8TC92 643 aaKnown RBP13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 CTAGE1Q96RT6 745 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 NONOQ15233 471 aaKnown RBP eCLIP13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 AMIGO3Q86WK7 504 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 CSGALNACT2Q8N6G5 542 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 ACRBPQ8NEB7 543 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 HPS3Q969F9 1004 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 DBNDD1Q9H9R9 158 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 RMND1Q9NWS8 449 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 A0A0U1RQG5 324 aaPredicted RBP13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 SEMA3EO15041 775 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 TMEM266Q2M3C6 531 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 SLC39A2Q9NP94 309 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 TMEM260Q9NX78 707 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 PCDHA4Q9UN74 947 aa13.36□□□□□ -0.27
SLC13A3-201ENST00000279027 KCNJ18B7U540 433 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 GNA11P29992 359 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 ZNF76P36508 570 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 SNAP25P60880 206 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 ARID5AQ03989 594 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 KCNJ12Q14500 433 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 PFKFB3Q16875 520 aaPredicted RBP13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 KCTD1Q719H9 257 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 USP17L5A8MUK1 530 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 C12orf60Q5U649 245 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 ZNF384Q8TF68 577 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 MATR3P43243 847 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■■□□□ 13.2
SLC13A3-201ENST00000279027 CEP95Q96GE4 821 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 LEMD3Q9Y2U8 911 aa13.35□□□□□ -0.27
SLC13A3-201ENST00000279027 CNTNAP5Q8WYK1 1306 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 FAM193AP78312 1265 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 TBC1D8BQ0IIM8 1120 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 UBE2SQ16763 222 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 REXO1Q8N1G1 1221 aaKnown RBP13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 LRRN4CLQ8ND94 238 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 GJA10Q969M2 543 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 BPIFA3Q9BQP9 254 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 TMEM60Q9H2L4 133 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms