RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 RAB20Q9NX57 234 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 HYOU1Q9Y4L1 999 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 ITKQ08881 620 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 PIK3AP1Q6ZUJ8 805 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 RPGRIP1Q96KN7 1286 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 FAM210AQ96ND0 272 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 NCOA5Q9HCD5 579 aaKnown RBP12.23□□□□□ -0.45
CHFR-201ENST00000266880 CAPN11Q9UMQ6 739 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 PACSIN2Q9UNF0 486 aaPredicted RBP12.23□□□□□ -0.45
CHFR-201ENST00000266880 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
CHFR-201ENST00000266880 ZBTB22O15209 634 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 ADCY1Q08828 1119 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 PNOCQ13519 176 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 DHX32Q7L7V1 743 aaKnown RBP12.23□□□□□ -0.45
CHFR-201ENST00000266880 USP26Q9BXU7 913 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 SFMBT1Q9UHJ3 866 aa12.23□□□□□ -0.45
CHFR-201ENST00000266880 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 FAM186BQ8IYM0 893 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 FLCNQ8NFG4 579 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 HFM1A2PYH4 1435 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 MCF2P10911 925 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 NPR1P16066 1061 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 HLA-DPA1P20036 260 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHFR-201ENST00000266880 EFCAB8A8MWE9 144 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 NBPF10Q6P3W6 841 aaKnown RBP12.22□□□□□ -0.45
CHFR-201ENST00000266880 MRPL44Q9H9J2 332 aaKnown RBP12.22□□□□□ -0.45
CHFR-201ENST00000266880 JAG2Q9Y219 1238 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 RNF113AO15541 343 aaKnown RBP12.22□□□□□ -0.45
CHFR-201ENST00000266880 MUM1L1Q5H9M0 696 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 EFHD1Q9BUP0 239 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 ANO3Q9BYT9 981 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 CHPF2Q9P2E5 772 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 PPP2R2CQ9Y2T4 447 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 CFLARO15519 480 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 YWHAGP61981 247 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHFR-201ENST00000266880 TMED2Q15363 201 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
CHFR-201ENST00000266880 MEIS3Q99687 375 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 INTS9Q9NV88 658 aaKnown RBP12.22□□□□□ -0.45
CHFR-201ENST00000266880 CD19P15391 556 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 STAM2O75886 525 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 ZNF449Q6P9G9 518 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 PTPN22Q9Y2R2 807 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 A0A087WUV0 522 aaPredicted RBP12.22□□□□□ -0.45
CHFR-201ENST00000266880 KRT19P08727 400 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 NAA35Q5VZE5 725 aa12.22□□□□□ -0.45
CHFR-201ENST00000266880 ATL3Q6DD88 541 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 NELFCDQ8IXH7 590 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 TADA3O75528 432 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 NCAPH2Q6IBW4 605 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 PAWRQ96IZ0 340 aaKnown RBP12.21□□□□□ -0.45
CHFR-201ENST00000266880 NLRC4Q9NPP4 1024 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 KCNJ18B7U540 433 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 GNPTABQ3T906 1256 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 PPP4R4Q6NUP7 873 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 DDX28Q9NUL7 540 aaKnown RBP12.21□□□□□ -0.45
CHFR-201ENST00000266880 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 DNAJC6O75061 913 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 GCNT3O95395 438 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 ZNF445P59923 1031 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 STRN3Q13033 797 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 MAD1L1Q9Y6D9 718 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 ASPHQ12797 758 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 EXOC7Q9UPT5 735 aa12.21□□□□□ -0.45
CHFR-201ENST00000266880 HNRNPCP07910 306 aaKnown RBP eCLIP12.21□□□□□ -0.46
CHFR-201ENST00000266880 DDIT3P35638 169 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 MSH2P43246 934 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 OCA2Q04671 838 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 MORC3Q14149 939 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 KCTD17Q8N5Z5 321 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 FIS1Q9Y3D6 152 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 TRIM50Q86XT4 487 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 NME9Q86XW9 330 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 HIPK4Q8NE63 616 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 DTNBO60941 627 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 KAZNQ674X7 775 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 FCHSD1Q86WN1 690 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 ZNF229Q9UJW7 825 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 LZTS1Q9Y250 596 aa12.21□□□□□ -0.46
CHFR-201ENST00000266880 ARHGEF35A5YM69 484 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 TOM1L1O75674 476 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 MRPL28Q13084 256 aaKnown RBP12.2□□□□□ -0.46
CHFR-201ENST00000266880 TTC38Q5R3I4 469 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 MAIP1Q8WWC4 291 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 WDR91A4D1P6 747 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 B4DLN1 442 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 MRPL12P52815 198 aaKnown RBP12.2□□□□□ -0.46
CHFR-201ENST00000266880 RAPGEF5Q92565 580 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 SAP30BPQ9UHR5 308 aaKnown RBP12.2□□□□□ -0.46
CHFR-201ENST00000266880 FBXO2Q9UK22 296 aaPredicted RBP12.2□□□□□ -0.46
CHFR-201ENST00000266880 PA2G4Q9UQ80 394 aaKnown RBP12.2□□□□□ -0.46
CHFR-201ENST00000266880 GRK7Q8WTQ7 553 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 MCM9Q9NXL9 1143 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms