RNA–Protein interactions for RNA: ENST00000265732.9

RBM48-201, Transcript of RNA binding motif protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM48, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-201ENST00000265732 RLFQ13129 1914 aa11.51□□□□□ -0.57
RBM48-201ENST00000265732 TLR2O60603 784 aa11.51□□□□□ -0.57
RBM48-201ENST00000265732 CASTP20810 708 aaKnown RBP11.51□□□□□ -0.57
RBM48-201ENST00000265732 NOVP48745 357 aa11.51□□□□□ -0.57
RBM48-201ENST00000265732 IKQ13123 557 aaPredicted RBP11.51□□□□□ -0.57
RBM48-201ENST00000265732 BLOC1S2Q6QNY1 142 aa11.51□□□□□ -0.57
RBM48-201ENST00000265732 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
RBM48-201ENST00000265732 DHX32Q7L7V1 743 aaKnown RBP11.51□□□□□ -0.57
RBM48-201ENST00000265732 PNMA1Q8ND90 353 aa11.51□□□□□ -0.57
RBM48-201ENST00000265732 KCNB2Q92953 911 aa11.51□□□□□ -0.57
RBM48-201ENST00000265732 LRRC2Q9BYS8 371 aa11.51□□□□□ -0.57
RBM48-201ENST00000265732 UPF2Q9HAU5 1272 aaKnown RBP11.51□□□□□ -0.57
RBM48-201ENST00000265732 FOXN1O15353 648 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 ANTXR2P58335 489 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 COG2Q14746 738 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 CCDC96Q2M329 555 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 TMEM87BQ96K49 555 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 TCEANC2Q96MN5 208 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 P2RX7Q99572 595 aaKnown RBP11.5□□□□□ -0.57
RBM48-201ENST00000265732 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 HOXC10Q9NYD6 342 aa11.5□□□□□ -0.57
RBM48-201ENST00000265732 MGAMO43451 1857 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 BMP3P12645 472 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 CPA1P15085 419 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 CTCFP49711 727 aaPredicted RBP11.49□□□□□ -0.57
RBM48-201ENST00000265732 HERVK_113P62684 666 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 COL9A3Q14050 684 aaPredicted RBP11.49□□□□□ -0.57
RBM48-201ENST00000265732 SEC23AQ15436 765 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 KCTD1Q719H9 257 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 TMTC2Q8N394 836 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 IGDCC4Q8TDY8 1250 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 ANKS1AQ92625 1134 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 CFHR5Q9BXR6 569 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 CPA4Q9UI42 421 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 HTTP42858 3142 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 CCDC69A6NI79 296 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 TMEM232C9JQI7 657 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 GPR25O00155 361 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
RBM48-201ENST00000265732 STAT2P52630 851 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 LBX1P52954 281 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 CATIPQ7Z7H3 387 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 ANKRD13CQ8N6S4 541 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 DCAF4Q8WV16 495 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 GMCL1Q96IK5 515 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 MTA3Q9BTC8 594 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 PAGR1Q9BTK6 254 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 CYP46A1Q9Y6A2 500 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 SMCHD1A6NHR9 2005 aa11.49□□□□□ -0.57
RBM48-201ENST00000265732 FRMPD2Q68DX3 1309 aaPredicted RBP11.48□□□□□ -0.57
RBM48-201ENST00000265732 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
RBM48-201ENST00000265732 PDHBP11177 359 aa11.48□□□□□ -0.57
RBM48-201ENST00000265732 ANAPC15P60006 121 aa11.48□□□□□ -0.57
RBM48-201ENST00000265732 CHURC1Q8WUH1 139 aa11.48□□□□□ -0.57
RBM48-201ENST00000265732 KIFC2Q96AC6 838 aa11.48□□□□□ -0.57
RBM48-201ENST00000265732 SLF1Q9BQI6 1058 aa11.48□□□□□ -0.57
RBM48-201ENST00000265732 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
RBM48-201ENST00000265732 LY9Q9HBG7 655 aa11.48□□□□□ -0.57
RBM48-201ENST00000265732 SENP2Q9HC62 589 aa11.48□□□□□ -0.57
RBM48-201ENST00000265732 GPHNQ9NQX3 736 aaPredicted RBP11.48□□□□□ -0.57
RBM48-201ENST00000265732 FEM1BQ9UK73 627 aa11.48□□□□□ -0.57
RBM48-201ENST00000265732 CTDP1Q9Y5B0 961 aaPredicted RBP11.48□□□□□ -0.57
RBM48-201ENST00000265732 WDR19Q8NEZ3 1342 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 SPDYE16A6NNV3 312 aaPredicted RBP11.47□□□□□ -0.57
RBM48-201ENST00000265732 SH2B2O14492 632 aaPredicted RBP11.47□□□□□ -0.57
RBM48-201ENST00000265732 RPS6KB1P23443 525 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 LIFRP42702 1097 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 EXOSC10Q01780 885 aaKnown RBP11.47□□□□□ -0.57
RBM48-201ENST00000265732 SP3Q02447 781 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 RUFY3Q7L099 469 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 PRPF38AQ8NAV1 312 aaKnown RBP11.47□□□□□ -0.57
RBM48-201ENST00000265732 GTF3C2Q8WUA4 911 aaPredicted RBP11.47□□□□□ -0.57
RBM48-201ENST00000265732 NUP133Q8WUM0 1156 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 ZNF296Q8WUU4 475 aaPredicted RBP11.47□□□□□ -0.57
RBM48-201ENST00000265732 C22orf23Q9BZE7 217 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 GPCPD1Q9NPB8 672 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 PPP1R9AQ9ULJ8 1098 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 NAP1L2Q9ULW6 460 aaPredicted RBP11.47□□□□□ -0.57
RBM48-201ENST00000265732 SLC12A7Q9Y666 1083 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 ZNFX1Q9P2E3 1918 aaKnown RBP11.47□□□□□ -0.57
RBM48-201ENST00000265732 BRCA2P51587 3418 aa11.47□□□□□ -0.57
RBM48-201ENST00000265732 PARP1P09874 1014 aaKnown RBP11.46□□□□□ -0.57
RBM48-201ENST00000265732 GOLGA8HP0CJ92 632 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 HSPA8P11142 646 aaKnown RBP11.46□□□□□ -0.57
RBM48-201ENST00000265732 DSG3P32926 999 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 PLS1Q14651 629 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 KIF22Q14807 665 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 GPATCH4Q5T3I0 446 aaKnown RBP11.46□□□□□ -0.57
RBM48-201ENST00000265732 C17orf99Q6UX52 265 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 SYNE3Q6ZMZ3 975 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 Q6ZUG5 572 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 CCAR1Q8IX12 1150 aaKnown RBP11.46□□□□□ -0.57
RBM48-201ENST00000265732 ATG4CQ96DT6 458 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 TM6SF1Q9BZW5 370 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
RBM48-201ENST00000265732 MYPNQ86TC9 1320 aa11.46□□□□□ -0.58
RBM48-201ENST00000265732 PEX10O60683 326 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms