RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 RBM26Q5T8P6 1007 aaKnown RBP17.55■□□□□ 0.4
SHTN1-201ENST00000260777 ZNF589Q86UQ0 364 aaPredicted RBP17.55■□□□□ 0.4
SHTN1-201ENST00000260777 MAGEF1Q9HAY2 307 aa17.55■□□□□ 0.4
SHTN1-201ENST00000260777 PCDHA5Q9Y5H7 936 aa17.55■□□□□ 0.4
SHTN1-201ENST00000260777 TARBP1Q13395 1621 aaKnown RBP17.55■□□□□ 0.4
SHTN1-201ENST00000260777 PABPN1LA6NDY0 278 aaKnown RBP17.55■□□□□ 0.4
SHTN1-201ENST00000260777 IRX3P78415 501 aaPredicted RBP17.55■□□□□ 0.4
SHTN1-201ENST00000260777 C11orf57Q6ZUT1 292 aaPredicted RBP17.55■□□□□ 0.4
SHTN1-201ENST00000260777 FAM71BQ8TC56 605 aa17.55■□□□□ 0.4
SHTN1-201ENST00000260777 PHLPP2Q6ZVD8 1323 aa17.55■□□□□ 0.4
SHTN1-201ENST00000260777 SYMPKQ92797 1274 aaKnown RBP17.55■□□□□ 0.4
SHTN1-201ENST00000260777 AMFRQ9UKV5 643 aa17.55■□□□□ 0.4
SHTN1-201ENST00000260777 CIB2O75838 187 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 OR52Z1P0C646 297 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 PPP2R5EQ16537 467 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 MYO1AQ9UBC5 1043 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 BIN2Q9UBW5 565 aaPredicted RBP17.54■□□□□ 0.4
SHTN1-201ENST00000260777 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SHTN1-201ENST00000260777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■■■□ 21.5
SHTN1-201ENST00000260777 KIF1BO60333 1816 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 MCTP2Q6DN12 878 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 CDC23Q9UJX2 597 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 EPN1Q9Y6I3 576 aaPredicted RBP17.54■□□□□ 0.4
SHTN1-201ENST00000260777 E7EVH7 732 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 COPB1P53618 953 aaKnown RBP17.54■□□□□ 0.4
SHTN1-201ENST00000260777 KRT71Q3SY84 523 aa17.54■□□□□ 0.4
SHTN1-201ENST00000260777 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
SHTN1-201ENST00000260777 POLA2Q14181 598 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 CFAP157Q5JU67 520 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 SRGAP1Q7Z6B7 1085 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 CCDC105Q8IYK2 499 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 CACTINQ8WUQ7 758 aaKnown RBP17.53■□□□□ 0.4
SHTN1-201ENST00000260777 UGGT1Q9NYU2 1555 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 CFAP65Q6ZU64 1925 aaKnown RBP17.53■□□□□ 0.4
SHTN1-201ENST00000260777 ERCC3P19447 782 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 STRN3Q13033 797 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 PROSER3Q2NL68 480 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 DPCR1Q3MIW9 517 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 DENND2CQ68D51 928 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 RABEP2Q9H5N1 569 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 SSX2IPQ9Y2D8 614 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 NAA25Q14CX7 972 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 SPATS2Q86XZ4 545 aaKnown RBP17.53■□□□□ 0.4
SHTN1-201ENST00000260777 LINC00301Q8NCQ3 95 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
SHTN1-201ENST00000260777 NEK8Q86SG6 692 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 PREX2Q70Z35 1606 aa17.53■□□□□ 0.4
SHTN1-201ENST00000260777 TRAPPC10P48553 1259 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 UAP1Q16222 522 aaPredicted RBP17.52■□□□□ 0.4
SHTN1-201ENST00000260777 APOA5Q6Q788 366 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 CCDC110Q8TBZ0 833 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 SP4Q02446 784 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 LONRF2Q1L5Z9 754 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 PNMA1Q8ND90 353 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 GDAP1L1Q96MZ0 367 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 GBP1P32455 592 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 STAT1P42224 750 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 RPS8P62241 208 aaKnown RBP17.52■□□□□ 0.4
SHTN1-201ENST00000260777 GNGT1P63211 74 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 PTGDRQ13258 359 aa17.52■□□□□ 0.4
SHTN1-201ENST00000260777 RNF26Q9BY78 433 aaPredicted RBP17.52■□□□□ 0.4
SHTN1-201ENST00000260777 USP6P35125 1406 aa17.52■□□□□ 0.39
SHTN1-201ENST00000260777 RAD51AP2Q09MP3 1159 aa17.52■□□□□ 0.39
SHTN1-201ENST00000260777 GPIHBP1Q8IV16 184 aa17.52■□□□□ 0.39
SHTN1-201ENST00000260777 FEZ2Q9UHY8 353 aaPredicted RBP17.52■□□□□ 0.39
SHTN1-201ENST00000260777 EFCAB6Q5THR3 1501 aa17.52■□□□□ 0.39
SHTN1-201ENST00000260777 LTKP29376 864 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 CTNNA1P35221 906 aaKnown RBP17.51■□□□□ 0.39
SHTN1-201ENST00000260777 TECP42680 631 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 KIF23Q02241 960 aaPredicted RBP17.51■□□□□ 0.39
SHTN1-201ENST00000260777 APBB1IPQ7Z5R6 666 aaPredicted RBP17.51■□□□□ 0.39
SHTN1-201ENST00000260777 GPBP1Q86WP2 473 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 SDR42E1Q8WUS8 393 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 CUEDC2Q9H467 287 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 FAM204AQ9H8W3 233 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 ANAPC4Q9UJX5 808 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 METP08581 1390 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 PDE8BO95263 885 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 APBA1Q02410 837 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 RESTQ13127 1097 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 MAP7D1Q3KQU3 841 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 GOLGA5Q8TBA6 731 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 CCDC160A6NGH7 325 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 M0R2C6 588 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 LAD1O00515 517 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 BUB1BO60566 1050 aaPredicted RBP17.51■□□□□ 0.39
SHTN1-201ENST00000260777 CASP14P31944 242 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 BCAMP50895 628 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 CACNA2D3Q8IZS8 1091 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 PI4K2BQ8TCG2 481 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 U2AF1L4Q8WU68 220 aaKnown RBP17.51■□□□□ 0.39
SHTN1-201ENST00000260777 ATG3Q9NT62 314 aa17.51■□□□□ 0.39
SHTN1-201ENST00000260777 MAP3K15Q6ZN16 1313 aa17.5■□□□□ 0.39
SHTN1-201ENST00000260777 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
SHTN1-201ENST00000260777 LMNTD2Q8IXW0 634 aa17.5■□□□□ 0.39
SHTN1-201ENST00000260777 VSIG1Q86XK7 387 aa17.5■□□□□ 0.39
SHTN1-201ENST00000260777 ZNF354CQ86Y25 554 aa17.5■□□□□ 0.39
SHTN1-201ENST00000260777 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHTN1-201ENST00000260777 KCNK3O14649 394 aa17.5■□□□□ 0.39
SHTN1-201ENST00000260777 TRPC3Q13507 836 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms