RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 YWHAEP62258 255 aaKnown RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 PSMD6Q15008 389 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 HERC4Q5GLZ8 1057 aaPredicted RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 ST13P4Q8IZP2 240 aaPredicted RBP9.03□□□□□ -0.96
APOB-201ENST00000233242 STRN3Q13033 797 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 TCP11Q8WWU5 503 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 ZBTB9Q96C00 473 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 YY1AP1Q9H869 796 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 KDM5BQ9UGL1 1544 aa9.03□□□□□ -0.96
APOB-201ENST00000233242 TTC36A6NLP5 189 aa9.02□□□□□ -0.96
APOB-201ENST00000233242 CTNND1O60716 968 aaKnown RBP9.02□□□□□ -0.96
APOB-201ENST00000233242 FAM173BQ6P4H8 233 aa9.02□□□□□ -0.96
APOB-201ENST00000233242 ADCY8P40145 1251 aa9.02□□□□□ -0.96
APOB-201ENST00000233242 ANKRD35Q8N283 1001 aa9.02□□□□□ -0.96
APOB-201ENST00000233242 NME8Q8N427 588 aa9.02□□□□□ -0.96
APOB-201ENST00000233242 PSMD1Q99460 953 aa9.02□□□□□ -0.96
APOB-201ENST00000233242 ATP5JP18859 108 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 PDCD2Q16342 344 aaPredicted RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 TRMT44Q8IYL2 757 aaKnown RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 HAUS1Q96CS2 278 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 MORC2Q9Y6X9 1032 aaPredicted RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 DKC1O60832 514 aaKnown RBP eCLIP9.02□□□□□ -0.978e-22■□□□□ 10.3
APOB-201ENST00000233242 MCM9Q9NXL9 1143 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 SEC31AO94979 1220 aaKnown RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 SDCCAG3Q96C92 435 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 ABCC2Q92887 1545 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 H2AFZP0C0S5 128 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 ATF2P15336 505 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 H2AFVQ71UI9 128 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 PDCD7Q8N8D1 485 aaKnown RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 USP28Q96RU2 1077 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 NCAPGQ9BPX3 1015 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 ANKRD2Q9GZV1 360 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 METTL14Q9HCE5 456 aaKnown RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 DNM3Q9UQ16 869 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 CFAP43Q8NDM7 1665 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 CCNT1O60563 726 aaKnown RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 HAUS2Q9NVX0 235 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 TRAPPC8Q9Y2L5 1435 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 SBNO2Q9Y2G9 1366 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 B4E1Z4 1266 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 SERPINB6P35237 376 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 VSTM4Q8IW00 320 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 NRBF2Q96F24 287 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 TTC6Q86TZ1 520 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 GFM2Q969S9 779 aaKnown RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 LRWD1Q9UFC0 647 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 IRX1P78414 480 aaPredicted RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 PBKQ96KB5 322 aa9.02□□□□□ -0.97
APOB-201ENST00000233242 LSM14BQ9BX40 385 aaKnown RBP9.02□□□□□ -0.97
APOB-201ENST00000233242 GPAA1O43292 621 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 JAK2O60674 1132 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 LMNB1P20700 586 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 TRAPPC10P48553 1259 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 PLIN2Q99541 437 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 FRMD3A2A2Y4 597 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 MBD4O95243 580 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 SLC35F6Q8N357 371 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.01□□□□□ -0.97
APOB-201ENST00000233242 PGRMC1O00264 195 aaKnown RBP9.01□□□□□ -0.97
APOB-201ENST00000233242 C6orf229H3BNL8 230 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 ANXA1P04083 346 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 MIS12Q9H081 205 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 ZMYM6O95789 1325 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 PALM2Q8IXS6 379 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 MAPK8IP1Q9UQF2 711 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 NPATQ14207 1427 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 KRT3P12035 628 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 PPP1R2P3Q6NXS1 205 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 TMTC3Q6ZXV5 915 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 CALCRLQ16602 461 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 ZC3H15Q8WU90 426 aaKnown RBP9.01□□□□□ -0.97
APOB-201ENST00000233242 OSBPL3Q9H4L5 887 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 ACEP12821 1306 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 IDI1Q13907 227 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 PPP6R2O75170 966 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 PUM3Q15397 648 aaKnown RBP9.01□□□□□ -0.97
APOB-201ENST00000233242 DHTKD1Q96HY7 919 aaPredicted RBP9.01□□□□□ -0.97
APOB-201ENST00000233242 ARMCX3Q9UH62 379 aaPredicted RBP9.01□□□□□ -0.97
APOB-201ENST00000233242 RXRAP19793 462 aa9.01□□□□□ -0.97
APOB-201ENST00000233242 COPB1P53618 953 aaKnown RBP9□□□□□ -0.97
APOB-201ENST00000233242 NR1H3Q13133 447 aa9□□□□□ -0.97
APOB-201ENST00000233242 SLC39A14Q15043 492 aa9□□□□□ -0.97
APOB-201ENST00000233242 PDLIM2Q96JY6 352 aa9□□□□□ -0.97
APOB-201ENST00000233242 E2F5Q15329 346 aa9□□□□□ -0.97
APOB-201ENST00000233242 PTPRKQ15262 1439 aa9□□□□□ -0.97
APOB-201ENST00000233242 HSPA8P11142 646 aaKnown RBP9□□□□□ -0.97
APOB-201ENST00000233242 CC2D1AQ6P1N0 951 aaPredicted RBP9□□□□□ -0.97
APOB-201ENST00000233242 SCYL3Q8IZE3 742 aa9□□□□□ -0.97
APOB-201ENST00000233242 MYOCDQ8IZQ8 938 aa9□□□□□ -0.97
APOB-201ENST00000233242 XAB2Q9HCS7 855 aaKnown RBP9□□□□□ -0.97
APOB-201ENST00000233242 CFAP73A6NFT4 308 aa9□□□□□ -0.97
APOB-201ENST00000233242 ARMC2Q8NEN0 867 aa9□□□□□ -0.97
APOB-201ENST00000233242 U2AF1L4Q8WU68 220 aaKnown RBP9□□□□□ -0.97
APOB-201ENST00000233242 FAM227BQ96M60 508 aa9□□□□□ -0.97
APOB-201ENST00000233242 PHEXP78562 749 aa9□□□□□ -0.97
APOB-201ENST00000233242 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
APOB-201ENST00000233242 NBPF5PQ86XG9 351 aaPredicted RBP9□□□□□ -0.97
APOB-201ENST00000233242 DENND2AQ9ULE3 1009 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms