RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ASIC2Q16515 512 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 C8orf74Q6P047 294 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 BLIDQ8IZY5 108 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 MYCT1Q8N699 235 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 NOX5Q96PH1 765 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 ATP8A2Q9NTI2 1148 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 EXOC7Q9UPT5 735 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 IGSF3O75054 1194 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 PDIA3P30101 505 aaKnown RBP12.8□□□□□ -0.36
NOD1-201ENST00000222823 UTP14CQ5TAP6 766 aaKnown RBP12.8□□□□□ -0.36
NOD1-201ENST00000222823 ANKS4BQ8N8V4 417 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 SECISBP2LQ93073 1101 aaKnown RBP12.8□□□□□ -0.36
NOD1-201ENST00000222823 SLF1Q9BQI6 1058 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 NT5C3AQ9H0P0 336 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 TMEM94Q12767 1356 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 MAP3K9P80192 1104 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 EPHA10Q5JZY3 1008 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 CARD10Q9BWT7 1032 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 ZBTB1Q9Y2K1 713 aa12.8□□□□□ -0.36
NOD1-201ENST00000222823 KLRF2D3W0D1 207 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 OGFRQ9NZT2 677 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
NOD1-201ENST00000222823 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 ADORA1P30542 326 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 KLHL30Q0D2K2 578 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 TXNDC16Q9P2K2 825 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 ZMYM6O95789 1325 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 PABPN1LA6NDY0 278 aaKnown RBP12.79□□□□□ -0.36
NOD1-201ENST00000222823 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 ZBED4O75132 1171 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
NOD1-201ENST00000222823 STRN3Q13033 797 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
NOD1-201ENST00000222823 NSUN7Q8NE18 718 aaKnown RBP12.79□□□□□ -0.36
NOD1-201ENST00000222823 FAM76AQ8TAV0 307 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 PCDHA7Q9UN72 937 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 GINS2Q9Y248 185 aa12.79□□□□□ -0.36
NOD1-201ENST00000222823 HEG1Q9ULI3 1381 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 GCNT3O95395 438 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 ATP2B4P23634 1241 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 CHURC1Q8WUH1 139 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 HOOK2Q96ED9 719 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 MRPL44Q9H9J2 332 aaKnown RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 FAM207AQ9NSI2 230 aaPredicted RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 APBA3O96018 575 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 SCG2P13521 617 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 ATP2A2P16615 1042 aaKnown RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 INF2Q27J81 1249 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 CCDC63Q8NA47 563 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 UBLCP1Q8WVY7 318 aaPredicted RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 NOP56O00567 594 aaKnown RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 LONRF3Q496Y0 759 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 OTUD6BQ8N6M0 293 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 CSRNP2Q9H175 543 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 KCNK9Q9NPC2 374 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 NLRC4Q9NPP4 1024 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 H7C1W4 665 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 ACTN4O43707 911 aaKnown RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 FLOT1O75955 427 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 MXRA7P84157 204 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 TRPC3Q13507 836 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 CCDC6Q16204 474 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 TTC16Q8NEE8 873 aa12.78□□□□□ -0.36
NOD1-201ENST00000222823 TDRD7Q8NHU6 1098 aaKnown RBP12.78□□□□□ -0.36
NOD1-201ENST00000222823 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.36
NOD1-201ENST00000222823 CTTNBP2NLQ9P2B4 639 aa12.77□□□□□ -0.36
NOD1-201ENST00000222823 PCDHA12Q9UN75 941 aa12.77□□□□□ -0.36
NOD1-201ENST00000222823 IVNS1ABPQ9Y6Y0 642 aa12.77□□□□□ -0.36
NOD1-201ENST00000222823 RPAP1Q9BWH6 1393 aaPredicted RBP12.77□□□□□ -0.36
NOD1-201ENST00000222823 CYP27B1O15528 508 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 TSGA10IPQ3SY00 556 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 APBB1IPQ7Z5R6 666 aaPredicted RBP12.77□□□□□ -0.37
NOD1-201ENST00000222823 PSMB7Q99436 277 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 IL25Q9H293 177 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 CEP104O60308 925 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 ADKP55263 362 aaKnown RBP12.77□□□□□ -0.37
NOD1-201ENST00000222823 ELF2Q15723 593 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 CCDC121Q6ZUS5 278 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 TPH2Q8IWU9 490 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 NIM1KQ8IY84 436 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.37
NOD1-201ENST00000222823 ARL1P40616 181 aaPredicted RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 CRKLP46109 303 aaKnown RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 RRAGAQ7L523 313 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 PSTPIP2Q9H939 334 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 GAS7O60861 476 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 GOLGA8HP0CJ92 632 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 PCP11498 1178 aaKnown RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 ERCC5P28715 1186 aaPredicted RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 RESTQ13127 1097 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms