RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 NEDD4P46934 1319 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 PLA2G6O60733 806 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 FAM83BQ5T0W9 1011 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 RAET1EQ8TD07 263 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 MAP4K1Q92918 833 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 ZNF333Q96JL9 665 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 ESYT1Q9BSJ8 1104 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 PAGR1Q9BTK6 254 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 KRT23Q9C075 422 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 TOMM22Q9NS69 142 aa20.55■□□□□ 0.88
MRPL28-201ENST00000199706 KIAA0100Q14667 2235 aaKnown RBP20.55■□□□□ 0.88
MRPL28-201ENST00000199706 FDX1P10109 184 aa20.54■□□□□ 0.88
MRPL28-201ENST00000199706 TOP1P11387 765 aaKnown RBP20.54■□□□□ 0.88
MRPL28-201ENST00000199706 FLT3LGP49771 235 aa20.54■□□□□ 0.88
MRPL28-201ENST00000199706 RRP12Q5JTH9 1297 aaKnown RBP20.54■□□□□ 0.88
MRPL28-201ENST00000199706 LRRC47Q8N1G4 583 aaKnown RBP20.54■□□□□ 0.88
MRPL28-201ENST00000199706 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
MRPL28-201ENST00000199706 BTBD7Q9P203 1132 aa20.54■□□□□ 0.88
MRPL28-201ENST00000199706 GJD2Q9UKL4 321 aa20.54■□□□□ 0.88
MRPL28-201ENST00000199706 CCDC85CA6NKD9 419 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 CDC45O75419 566 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 XRCC5P13010 732 aaKnown RBP20.53■□□□□ 0.88
MRPL28-201ENST00000199706 COPB2P35606 906 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 PTH1RQ03431 593 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 Q3C1V9 767 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 SLFN13Q68D06 897 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 RCSD1Q6JBY9 416 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 CASC1Q6TDU7 716 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 IQCA1Q86XH1 822 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 PRPF38AQ8NAV1 312 aaKnown RBP20.53■□□□□ 0.88
MRPL28-201ENST00000199706 ANKS1AQ92625 1134 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 ATG4CQ96DT6 458 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 SPATC1LQ9H0A9 340 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 PORCNQ9H237 461 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 FEM1BQ9UK73 627 aa20.53■□□□□ 0.88
MRPL28-201ENST00000199706 VWA5AO00534 786 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 ATP2A1O14983 1001 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 NMT2O60551 498 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 BMP3P12645 472 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 GRK4P32298 578 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 KIAA1211Q6ZU35 1233 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 GPR142Q7Z601 462 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 PLEKHH3Q7Z736 793 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 CCAR1Q8IX12 1150 aaKnown RBP20.52■□□□□ 0.88
MRPL28-201ENST00000199706 DCAF4Q8WV16 495 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 USP6NLQ92738 828 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 MROH8Q9H579 483 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 GABRQQ9UN88 632 aa20.52■□□□□ 0.88
MRPL28-201ENST00000199706 SLC25A27O95847 323 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 CYP21A2P08686 494 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 RGS19P49795 217 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 OAZ1P54368 228 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 MORN1Q5T089 497 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 FAM160B2Q86V87 743 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 SKAP1Q86WV1 359 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 TRMT44Q8IYL2 757 aaKnown RBP20.51■□□□□ 0.87
MRPL28-201ENST00000199706 REPS2Q8NFH8 660 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 NUDT12Q9BQG2 462 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 MOV10L1Q9BXT6 1211 aaKnown RBP20.51■□□□□ 0.87
MRPL28-201ENST00000199706 LSG1Q9H089 658 aaKnown RBP20.51■□□□□ 0.87
MRPL28-201ENST00000199706 FBXO28Q9NVF7 368 aa20.51■□□□□ 0.87
MRPL28-201ENST00000199706 STRNO43815 780 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 KDM4AO75164 1064 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 HOXC6P09630 235 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 SLC1A4P43007 532 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 STAT2P52630 851 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 GRB14Q14449 540 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 ABRAQ8N0Z2 381 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 CHURC1Q8WUH1 139 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 NUP88Q99567 741 aaPredicted RBP20.5■□□□□ 0.87
MRPL28-201ENST00000199706 TMEM47Q9BQJ4 181 aa20.5■□□□□ 0.87
MRPL28-201ENST00000199706 ZNF214Q9UL59 606 aaPredicted RBP20.5■□□□□ 0.87
MRPL28-201ENST00000199706 SLC15A5A6NIM6 579 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 RAD21O60216 631 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 ADCY3O60266 1144 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 PEX10O60683 326 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 SNHG28P0DPA3 235 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 TRDNQ13061 729 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 TMEM132BQ14DG7 1078 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.49■□□□□ 0.87
MRPL28-201ENST00000199706 RIOX2Q8IUF8 465 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 SLC38A10Q9HBR0 1119 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 RBM8AQ9Y5S9 174 aaKnown RBP20.49■□□□□ 0.87
MRPL28-201ENST00000199706 IVNS1ABPQ9Y6Y0 642 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 BRCA2P51587 3418 aa20.49■□□□□ 0.87
MRPL28-201ENST00000199706 B4E1Z4 1266 aa20.48■□□□□ 0.87
MRPL28-201ENST00000199706 CAPN2P17655 700 aa20.48■□□□□ 0.87
MRPL28-201ENST00000199706 PTPREP23469 700 aa20.48■□□□□ 0.87
MRPL28-201ENST00000199706 RGS2P41220 211 aa20.48■□□□□ 0.87
MRPL28-201ENST00000199706 ZSCAN10Q96SZ4 725 aaPredicted RBP20.48■□□□□ 0.87
MRPL28-201ENST00000199706 APBA2Q99767 749 aa20.48■□□□□ 0.87
MRPL28-201ENST00000199706 TEX13BQ9BXU2 312 aa20.48■□□□□ 0.87
MRPL28-201ENST00000199706 ZSWIM5Q9P217 1185 aa20.48■□□□□ 0.87
MRPL28-201ENST00000199706 HMGCRP04035 888 aa20.47■□□□□ 0.87
MRPL28-201ENST00000199706 UBXN2AP68543 259 aa20.47■□□□□ 0.87
MRPL28-201ENST00000199706 BTNL9Q6UXG8 535 aa20.47■□□□□ 0.87
MRPL28-201ENST00000199706 NKX2-3Q8TAU0 364 aa20.47■□□□□ 0.87
MRPL28-201ENST00000199706 UBAC1Q9BSL1 405 aa20.47■□□□□ 0.87
MRPL28-201ENST00000199706 MTA3Q9BTC8 594 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms