RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Fam196bQ6GQV1 535 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Hirip3Q8BLH7 601 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Arhgef6Q8K4I3 771 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Clstn1Q9EPL2 979 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Inpp4aQ9EPW0 939 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Tfap4Q9JIZ5 338 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Pde4aO89084 844 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Mboat4P0C7A3 435 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 D1Pas1P16381 660 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Wnt10bP48614 389 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 CebpaP53566 359 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ncf1Q09014 390 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Zkscan4Q5SZT6 480 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ces3aQ63880 571 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Exoc8Q6PGF7 716 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Epha10Q8BYG9 1007 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Golph3lQ8R088 285 aaKnown RBP16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ces3bQ8VCU1 571 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Trim11Q99PQ2 467 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Fam205a1D3YZF6 1314 aa16.31■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Tex13cD3YU32 604 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Nfil3O08750 462 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Epb41l2O70318 988 aaKnown RBP16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Trim30aP15533 496 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Cap1P40124 474 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Myo1bP46735 1107 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Gcnt1Q09324 428 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Rhpn1Q61085 643 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Zbtb39Q6PDK0 712 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Scfd1Q8BRF7 639 aaKnown RBP16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ccz1Q8C1Y8 480 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Luzp1Q8R4U7 1068 aaKnown RBP16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ndufb9Q9CQJ8 179 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ktn1Q61595 1327 aaKnown RBP16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Zfp853A0A1D5RM95 733 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ms4a1P19437 291 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Eif5P59325 429 aaKnown RBP16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Lilrb3P97484 841 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Trappc10Q3TLI0 1259 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Qrich1Q3UA37 777 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Mdh1bQ5F204 500 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Cyp7b1Q60991 507 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Adgrg6Q6F3F9 1165 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Tcp11l1Q8BTG3 509 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ptrh1Q8BW00 204 aa16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 SltmQ8CH25 1031 aaKnown RBP16.3■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Frmpd4A2AFR3 1320 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Dnai2A2AC93 623 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Eif6O55135 245 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 En2P09066 324 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 CtshP49935 333 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Lrch1P62046 709 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 NyxP83503 476 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Plekha7Q3UIL6 1118 aaKnown RBP16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Slc9c1Q6UJY2 1175 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Tmem87aQ8BXN9 555 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Smc2Q8CG48 1191 aaKnown RBP16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Sox30Q8CGW4 782 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Rbm42Q91V81 474 aaKnown RBP16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Hps3Q91VB4 1002 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ankrd1Q9CR42 319 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Klf15Q9EPW2 415 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ubxn8Q9QZ49 277 aa16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Acot9Q9R0X4 439 aaKnown RBP16.29■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Gm30191A0A0U1RNT7 187 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Sept2P42208 361 aaKnown RBP16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Pfkfb1P70266 471 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Klrg2Q3UM83 387 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Haus6Q6NV99 933 aaKnown RBP16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Pcdhb14Q6PB90 796 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Clca4aQ6Q473 924 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Lrrc8aQ80WG5 810 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 LRWD1Q8BUI3 648 aaKnown RBP16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Zfp202Q8C879 641 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Rbm19Q8R3C6 952 aaKnown RBP16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 FktnQ8R507 461 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Tesk2Q8VCT9 570 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 TbcbQ9D1E6 244 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Myo1hQ9D6A1 958 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Usp31E9Q6Y8 1344 aa16.28■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Pabpc1lA2A5N3 607 aaKnown RBP16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 D630036H23RikQ3UQD6 204 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Tshz1Q5DTH5 1084 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Rec8Q8C5S7 591 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Cdan1Q8CC12 1239 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Riox2Q8CD15 465 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Nat10Q8K224 1024 aaKnown RBP16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Gpsm2Q8VDU0 679 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ppil2Q9D787 521 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 ArcQ9WV31 396 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Stxbp4Q9WV89 557 aa16.27■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Dhx8A2A4P0 1244 aaKnown RBP16.27■□□□□ 0.19
Ssr1-204ENSMUST00000225319 GmpsQ3THK7 693 aa16.27■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Pla2g4eQ50L42 875 aa16.27■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Tmem39bQ810L4 492 aa16.27■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Gmcl1Q920G9 524 aa16.27■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Krt23Q99PS0 422 aa16.27■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Btn2a2A4QPC6 514 aa16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Cyp26c1B2RXA7 518 aa16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Phldb3E9QAF4 648 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms