RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Ppp2r5eQ61151 467 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Q8R1Y2 203 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Stat2Q9WVL2 923 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Fhod3Q76LL6 1578 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Col17a1Q07563 1470 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Cfap52Q5F201 620 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Stag1Q9D3E6 1258 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Gimd1E9PW74 217 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Gm4841E9QAA8 417 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Rad51bO35719 350 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 CopeO89079 308 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Ets1P27577 440 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Kmt5aQ2YDW7 349 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Rhpn1Q61085 643 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Ddx41Q91VN6 622 aaKnown RBP13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 MlklQ9D2Y4 472 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Nlrp5Q9R1M5 1163 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Znf568E9PYI1 671 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Ptpn14Q62130 1189 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Bloc1s4Q8VED2 215 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Mms19Q9D071 1031 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Mmp8O70138 465 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Traf5P70191 558 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 DohhA0A1Y7VJ29 135 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Nod2Q8K3Z0 1020 aa13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 HnrnpcQ9Z204 313 aaKnown RBP13.73□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Prrc2bQ7TPM1 1486 aaKnown RBP13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Peg3Q3URU2 1571 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Hps4Q99KG7 671 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Xrcc5P27641 732 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Avpr1aQ62463 423 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Iqcb1Q8BP00 598 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Serpinb13Q8CDC0 389 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Spats2Q8K1N4 545 aaKnown RBP13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Dph5Q9CWQ0 281 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Xab2Q9DCD2 855 aaKnown RBP13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Gna14P30677 355 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Adcy8P97490 1249 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Serpina3bQ8BYY9 420 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Pcdhb12Q91Y07 789 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 PpanQ91YU8 470 aaKnown RBP13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Mlh1Q9JK91 760 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Akt3Q9WUA6 479 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Veph1A1A535 833 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Zscan2Q07230 614 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 D130040H23RikQ8BII3 405 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Tor1aip1Q921T2 595 aaKnown RBP13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Zcrb1Q9CZ96 217 aaKnown RBP13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Srrm1Q52KI8 946 aaKnown RBP13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Stn1Q8K2X3 378 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 EhhadhQ9DBM2 718 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Stk32bQ9JJX8 414 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Acot10Q32MW3 439 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Ncoa7Q6DFV7 943 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Armcx3Q8BHS6 379 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Psma7Q9Z2U0 248 aa13.72□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Cog7Q3UM29 770 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Rad17Q6NXW6 688 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Dpp8Q80YA7 892 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Kif2bQ8C0N1 668 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Kcnj14Q8JZN3 434 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 HscbQ8K3A0 234 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Tbx22Q8K402 517 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 HmcesQ8R1M0 353 aaKnown RBP13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Elf2Q9JHC9 593 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Txnrd1Q9JMH6 613 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Rabgap1A2AWA9 1064 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Otud7bB2RUR8 840 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 LdhbP16125 334 aaKnown RBP13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Ccdc154Q6RUT8 657 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Stk38lQ7TSE6 464 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Kif2cQ922S8 721 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Ccdc78D3Z5T1 437 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Ccdc33Q3ULW6 985 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Morc4Q8BMD7 928 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Gm6657A0A1B0GRJ3 277 aa13.71□□□□□ -0.21
Col6a3-208ENSMUST00000188587 Pcif1P59114 706 aa13.71□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gm156Q58A37 223 aa13.71□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Myh7Q91Z83 1935 aa13.71□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Trappc8E9PWG2 1437 aa13.71□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Timm44O35857 452 aa13.71□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Slc10a4Q3UEZ8 437 aa13.71□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Cabcoco1Q8CDT7 208 aa13.71□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Rnf14Q9JI90 485 aa13.71□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ccdc88cQ6VGS5 2009 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Kcnb2A6H8H5 907 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gnl1P36916 607 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ftl2P49945 183 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Kctd6Q8BNL5 237 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Psip1Q99JF8 528 aaKnown RBP13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Anxa1P10107 346 aaKnown RBP13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gadd45bP22339 160 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Fhdc1Q3ULZ2 1149 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Tmx3Q8BXZ1 456 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Sdr42e1Q9D665 394 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Polr3cQ9D483 533 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Adgrb2Q8CGM1 1561 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Exoc3l2D3YUP5 789 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gm28043E0CXC2 719 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ift81O35594 676 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 172.4 ms