RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Atp6v0a4Q920R6 833 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Topbp1Q6ZQF0 1515 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Alpk3Q924C5 1678 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gm21680A0A0G2JGR8 267 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 4932429P05RikA2ADI4 785 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gm382B1AXN3 1250 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 CflarO35732 481 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cyp26a1O55127 497 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Hspa2P17156 633 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pald1P70261 859 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 RalgdsQ03385 852 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Abl2Q4JIM5 1182 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ccdc157Q5SPX1 718 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 RragbQ6NTA4 374 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cacna2d3Q9Z1L5 1091 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Kiaa1210E9Q0C6 1637 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 FscbA1EGX6 1074 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Nr1i2O54915 431 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Acsbg2Q2XU92 667 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 C87499Q3UX49 493 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 MaeaQ4VC33 396 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Irf9Q61179 399 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Phc1Q64028 1012 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gga2Q6P5E6 603 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Smarca1Q6PGB8 1046 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tbc1d5Q80XQ2 815 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Caps2Q8BUG5 550 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sgsm3Q8VCZ6 750 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Myh13B1AR69 1938 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Scgb2b11A0A087WR49 112 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Zscan18E9PUD6 809 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Timm10P62073 90 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 G3bp2P97379 482 aaKnown RBP8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Yipf3Q3UDR8 347 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ccdc42Q5SV66 316 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Igbp1Q61249 340 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 PolnQ7TQ07 864 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cyp4f39Q8BGU0 532 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Iffo1Q8BXL9 562 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ssh3Q8K330 649 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pcdha12Q91Y18 950 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Smc6Q924W5 1097 aa8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Hic2Q9JLZ6 619 aaKnown RBP8.47□□□□□ -1.05
Bdnf-209ENSMUST00000111050 RereQ80TZ9 1558 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Map7d1A2AJI0 846 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gap43P06837 227 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cyp7b1Q60991 507 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Myl10Q62082 202 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tacc1Q6Y685 774 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Champ1Q8K327 802 aaKnown RBP8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Slc35f6Q8VE96 372 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ubxn1Q922Y1 297 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Epb41l2O70318 988 aaKnown RBP8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Agbl1Q09M05 972 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Spout1Q3UHX9 385 aaKnown RBP8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ankrd13cQ3UX43 541 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Fam170aQ66LM6 333 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gigyf2Q6Y7W8 1291 aaKnown RBP8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 C1qtnf12Q8R2Z0 308 aa8.46□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Wdr19Q3UGF1 1341 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gm21190A0A0G2JGJ6 266 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Klc1O88447 541 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ercc5P35689 1170 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Hsd17b1P51656 344 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Fam207aP58468 219 aaKnown RBP8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Exoc3Q6KAR6 755 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Arhgap18Q8K0Q5 663 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Pex19Q8VCI5 299 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Washc1Q8VDD8 475 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Dnajc5bQ9CQ94 199 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Psma8Q9CWH6 250 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tbc1d7Q9D0K0 293 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nsmce1Q9D720 266 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 1700109H08RikQ9D9C0 210 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Abt1Q9QYL7 269 aaKnown RBP8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Angptl3Q9R182 455 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Fbf1A2A870 1173 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gm7361D3Z6R1 267 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cpsf2O35218 782 aaKnown RBP8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Carmil2Q3V3V9 1296 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Krt74Q6IFZ9 495 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Slc51bQ80WK2 128 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Wdr35Q8BND3 1181 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 HibchQ8QZS1 385 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ccdc65Q8VHI7 493 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Wdr64Q9D565 1086 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ccdc182Q9D9C6 152 aa8.46□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gm28919A0A087WP35 240 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Samd15F6XZJ7 620 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ebf2O08792 575 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tex35Q14BK3 207 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 HelqQ2VPA6 1069 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Git1Q68FF6 770 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 WlsQ6DID7 541 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tmem132eQ6IEE6 982 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cep128Q8BI22 1102 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ranbp6Q8BIV3 1105 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Lsm14bQ8CGC4 385 aaKnown RBP8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Capn9Q9D805 690 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 CpdO89001 1377 aa8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms