RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Eif3j1Q3UGC7 261 aaKnown RBP18.24■□□□□ 0.51
Trim28-201ENSMUST00000005705 Eif3j2Q66JS6 263 aa18.24■□□□□ 0.51
Trim28-201ENSMUST00000005705 Usp27Q8CEG8 438 aa18.24■□□□□ 0.51
Trim28-201ENSMUST00000005705 Gm30191A0A0U1RNT7 187 aa18.24■□□□□ 0.51
Trim28-201ENSMUST00000005705 Fkbp1aP26883 108 aaKnown RBP18.24■□□□□ 0.51
Trim28-201ENSMUST00000005705 Kif2bQ8C0N1 668 aa18.24■□□□□ 0.51
Trim28-201ENSMUST00000005705 Wdr19Q3UGF1 1341 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Cdh15P33146 784 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Cnnm2Q3TWN3 875 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Oxr1Q4KMM3 866 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Olfr118Q7TRJ6 321 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 RabggtaQ9JHK4 567 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Olfr119Q7TRJ5 321 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Wasf1Q8R5H6 559 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Rrp1bQ91YK2 724 aaKnown RBP18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Ybx3Q9JKB3 361 aaKnown RBP18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Ppp2r3dQ9Z176 491 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Tcp10bE9PYJ0 438 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Ptpn12P35831 775 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Ccdc14Q8K2J4 934 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 Egfl6Q9JJZ5 550 aa18.23■□□□□ 0.51
Trim28-201ENSMUST00000005705 4931408C20RikE9PWP9 1381 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Zfand4D3Z3C6 739 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Trap1aP19473 224 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Dnajc17Q91WT4 303 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Mfap3lQ9D3X9 409 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Acad12D3Z7X0 555 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Gm5134E9QAB5 671 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Rc3h1Q4VGL6 1130 aaKnown RBP18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Ctr9Q62018 1173 aaKnown RBP18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Slc44a1Q6X893 653 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 NelfbQ8C4Y3 580 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 NapgQ9CWZ7 312 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Klhl40Q9D783 621 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Myh7bA2AQP0 1941 aa18.22■□□□□ 0.51
Trim28-201ENSMUST00000005705 Ankrd63A2ARS0 390 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Copb2O55029 905 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Nr5a1P33242 462 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Slc7a3P70423 618 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Tmem232Q5K6N0 675 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Il17raQ60943 864 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Nek5Q7TSC3 627 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Fam217aQ9D9W6 419 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Gpaa1Q9WTK3 621 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Myh7Q91Z83 1935 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 MthfslL7N466 203 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Nkx2-5P42582 318 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Cct5P80316 541 aaKnown RBP18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Sycp1Q62209 993 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Phldb2Q8K1N2 1249 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Trim29Q8R2Q0 587 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Tob2Q9JM55 345 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Sipa1l3G3X9J0 1776 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Ppef2O35385 757 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Prl7d1P04769 244 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Rad23bP54728 416 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Tacc1Q6Y685 774 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Trp53inp1Q9QXE4 239 aa18.21■□□□□ 0.51
Trim28-201ENSMUST00000005705 Kcna1P16388 495 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Cep63Q3UPP8 700 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 MlphQ91V27 590 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Cfap45Q9D9U9 551 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Pex3Q9QXY9 372 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Col22a1E9Q7P1 1613 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Zfpm1O35615 995 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Mars2Q499X9 586 aaKnown RBP18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Foxd1Q61345 456 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Rnf41Q8BH75 317 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Anks1bQ8BIZ1 1259 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 QarsQ8BML9 775 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Cacnb1Q8R3Z5 597 aa18.2■□□□□ 0.5
Trim28-201ENSMUST00000005705 Prl2c3P04768 224 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Atp1b3P97370 278 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Znf428Q8C1M2 176 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Q8C1R3 189 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Setdb2Q8C267 713 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Mfap3Q922T2 349 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Kank3Q9Z1P7 791 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Izumo3A6PWV3 263 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Gfpt1P47856 697 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Fam196bQ6GQV1 535 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Nme8Q715T0 586 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Brd2Q7JJ13 798 aaKnown RBP18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Bbs9Q811G0 885 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Rnf187Q8BFX1 236 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Cep128Q8BI22 1102 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Gimap7Q8R379 293 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Grin3bQ91ZU9 1003 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Galntl5Q9D4M9 431 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Gm7347D3YYI9 267 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Speer4aF8VPX6 267 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Cyp3a25O09158 503 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 ChkbO55229 394 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Sval3Q76I99 144 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Tango6Q8C3S2 1079 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Atp1a1Q8VDN2 1023 aaKnown RBP18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Ndufv1Q91YT0 464 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Nol7Q9D7Z3 254 aaKnown RBP18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Ubxn8Q9QZ49 277 aa18.19■□□□□ 0.5
Trim28-201ENSMUST00000005705 Brwd3A2AHJ4 1799 aa18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms