RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Leo1Q5XJE5 667 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Slc27a1Q60714 646 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 SltmQ8CH25 1031 aaKnown RBP16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Tm4sf4Q91XD3 202 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Cd2apQ9JLQ0 637 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Ccdc88aQ5SNZ0 1873 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 FosbP13346 338 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 LdhbP16125 334 aaKnown RBP16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Irf5P56477 497 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Otud5Q3U2S4 566 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 PRAG1Q571I4 1179 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Arhgef2Q60875 985 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Rhpn1Q61085 643 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Ptger2Q62053 362 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Trnp1Q80ZI1 223 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Pspc1Q8R326 523 aaKnown RBP16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 SdsQ8VBT2 327 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Vta1Q9CR26 309 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 PtmsQ9D0J8 101 aaKnown RBP16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Fam122aQ9DB52 284 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Myh8P13542 1937 aa16.98■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Thsd7bQ6P4U0 1607 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Brca1P48754 1812 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Igsf9bE9PZ19 1328 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Il13ra2O88786 383 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Tph1P17532 447 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Cbx2P30658 519 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Gdf10P97737 476 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Mars2Q499X9 586 aaKnown RBP16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Rgl2Q61193 778 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 PigsQ6PD26 555 aaKnown RBP16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 PogkQ80TC5 607 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 BC048507Q80ZS7 89 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Fbxo28Q8BIG4 368 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Onecut3Q8K557 490 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Vmn1r199Q8R280 367 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Arhgef25Q9CWR0 618 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Sapcd2Q9D818 391 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Prg3Q9JL95 222 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Homer1Q9Z2Y3 366 aa16.97■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Dnai2A2AC93 623 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Usp17ldG5E8G2 545 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Usp17lcG5E8I7 545 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Kcna1P16388 495 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Dnm1P39053 867 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Fam83hQ148V8 1209 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Sp4Q62445 782 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Recql4Q75NR7 1216 aaKnown RBP16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Pxylp1Q8BHA9 480 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Slc4a7Q8BTY2 1034 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Zfp317Q8C0Q5 607 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Cdan1Q8CC12 1239 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Depdc1aQ8CIG0 804 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Kcnj14Q8JZN3 434 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Bloc1s4Q8VED2 215 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 BaatQ91X34 420 aa16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Pdcd6ipQ9WU78 869 aaKnown RBP16.96■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Plcg1Q62077 1302 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Arrdc4A0A0B4J1F4 415 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Pabpc1lA2A5N3 607 aaKnown RBP16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Pus7B7ZNL8 666 aaKnown RBP16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Atoh1P48985 351 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Gcnt1Q09324 428 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Fam89aQ14BJ1 175 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Ccdc84Q4VA36 332 aaKnown RBP16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Ifit1Q64282 463 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Znf219Q6IQX8 726 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Acnat2Q8BGG9 420 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Gprasp2Q8BUY8 826 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Kdm4aQ8BW72 1064 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Cog5Q8C0L8 829 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Gpcpd1Q8C0L9 675 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Oxnad1Q8VE38 311 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Nr3c2Q8VII8 978 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Tdrd3Q91W18 743 aaKnown RBP16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Mrpl11Q9CQF0 192 aaKnown RBP16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Fsip1Q9D3V5 435 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Etnk1Q9D4V0 363 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 4921524L21RikQ9D5T2 438 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Ubiad1Q9DC60 336 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Ubxn8Q9QZ49 277 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Ifi202Q9R002 445 aa16.95■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Dnaaf5B9EJR8 853 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 MthfslL7N466 203 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Rnf216P58283 853 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Snap25P60879 206 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Pls1Q3V0K9 630 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Peg10Q7TN75 958 aaKnown RBP16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Dnaaf2Q8BPI1 814 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Zhx2Q8C0C0 836 aaKnown RBP16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 DpydQ8CHR6 1025 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Evc2Q8K1G2 1220 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 TbcbQ9D1E6 244 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 SerhlQ9EPB5 311 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Tfcp2Q9ERA0 502 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Tjp3Q9QXY1 905 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Dock2Q8C3J5 1828 aa16.94■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Ppp1r9aH3BJD6 1292 aa16.93■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Ccng2O08918 344 aa16.93■□□□□ 0.3
Ercc1-201ENSMUST00000003645 Lamp1P11438 406 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms