RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 CPLX1O14810 134 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 ZBTB43O43298 467 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 NMT2O60551 498 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 DDAH1O94760 285 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 METAP2P50579 478 aaKnown RBP eCLIP15.13■□□□□ 0.011e-10■■■□□ 15.8
PHGDH-218ENST00000641491 AK2P54819 239 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 MOB2Q70IA6 237 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 MICU3Q86XE3 530 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 OPTNQ96CV9 577 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 ZSCAN31Q96LW9 406 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-218ENST00000641491 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-218ENST00000641491 SYNPO2Q9UMS6 1093 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 MAP2K2P36507 400 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 SLC1A4P43007 532 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 ANTXR2P58335 489 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 EXOSC10Q01780 885 aaKnown RBP15.12■□□□□ 0.01
PHGDH-218ENST00000641491 FMR1Q06787 632 aaKnown RBP eCLIP15.12■□□□□ 0.018e-7■■□□□ 12
PHGDH-218ENST00000641491 APOBRQ0VD83 1088 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 GRM1Q13255 1194 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 PPIL2Q13356 520 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 SNAPC2Q13487 334 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 CYP4F22Q6NT55 531 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 USP17L2Q6R6M4 530 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-218ENST00000641491 ZNF654Q8IZM8 581 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 TMEM47Q9BQJ4 181 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 MCOLN1Q9GZU1 580 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 LY9Q9HBG7 655 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 SH2B1Q9NRF2 756 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-218ENST00000641491 RBM28Q9NW13 759 aaKnown RBP15.12■□□□□ 0.01
PHGDH-218ENST00000641491 LIMCH1Q9UPQ0 1083 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 TACC3Q9Y6A5 838 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
PHGDH-218ENST00000641491 SPDYE5A6NIY4 337 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 CDKL5O76039 1030 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 PARP1P09874 1014 aaKnown RBP15.11■□□□□ 0.01
PHGDH-218ENST00000641491 GNAQP50148 359 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
PHGDH-218ENST00000641491 SPP2Q13103 211 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 STK3Q13188 491 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.01
PHGDH-218ENST00000641491 MTMR2Q13614 643 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 SLFN13Q68D06 897 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 RGMBQ6NW40 437 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 GADL1Q6ZQY3 521 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 CLEC10AQ8IUN9 316 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 IGDCC4Q8TDY8 1250 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 DCAF4Q8WV16 495 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 LPAR1Q92633 364 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 CCDC102AQ96A19 550 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 WDR18Q9BV38 432 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 ALDH8A1Q9H2A2 487 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-218ENST00000641491 IL17RBQ9NRM6 502 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 MYH8P13535 1937 aa15.11■□□□□ 0.01
PHGDH-218ENST00000641491 IGKV6D-41A0A0C4DH26 115 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 CA12O43570 354 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 GTF2A2P52657 109 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 RCAN1P53805 252 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 RRP1BQ14684 758 aaKnown RBP15.1■□□□□ 0.01
PHGDH-218ENST00000641491 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 RTN1Q16799 776 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 LDLRAD1Q5T700 205 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 FASTKD5Q7L8L6 764 aaKnown RBP15.1■□□□□ 0.01
PHGDH-218ENST00000641491 SGMS1Q86VZ5 419 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 CLMNQ96JQ2 1002 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 TANGO6Q9C0B7 1094 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 TMX2Q9Y320 296 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 TLL2Q9Y6L7 1015 aa15.1■□□□□ 0.01
PHGDH-218ENST00000641491 CXCL11O14625 94 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 ZBTB48P10074 688 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-218ENST00000641491 BACE1P56817 501 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 MKRN3Q13064 507 aaKnown RBP15.09■□□□□ 0.01
PHGDH-218ENST00000641491 SEC23AQ15436 765 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 SHROOM1Q2M3G4 852 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-218ENST00000641491 ASPRV1Q53RT3 343 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 GPATCH4Q5T3I0 446 aaKnown RBP15.09■□□□□ 0.01
PHGDH-218ENST00000641491 CST9Q5W186 159 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-218ENST00000641491 CCDC84Q86UT8 332 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-218ENST00000641491 CCDC144CPQ8IYA2 1237 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 FBXL16Q8N461 479 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 GMCL1P1Q8NEA9 526 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 ANKS1AQ92625 1134 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 ZNF274Q96GC6 653 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-218ENST00000641491 WNK4Q96J92 1243 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 KIF2CQ99661 725 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 KIAA1683Q9H0B3 1180 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 VCPKMTQ9H867 229 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-218ENST00000641491 KIF3AQ9Y496 699 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 THSD7BQ9C0I4 1608 aa15.09■□□□□ 0.01
PHGDH-218ENST00000641491 SIPA1L1O43166 1804 aa15.08■□□□□ 0.01
PHGDH-218ENST00000641491 F5H6K3 240 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
PHGDH-218ENST00000641491 CETPP11597 493 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 BMP3P12645 472 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 GUCY1A2P33402 732 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms