RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 PLEKHH3Q7Z736 793 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 SIAH1Q8IUQ4 282 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 U2AF1L4Q8WU68 220 aaKnown RBP30.15■■■□□ 2.42
VEGFA-230ENST00000640482 NACAP1Q9BZK3 213 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 VCPKMTQ9H867 229 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 MKNK2Q9HBH9 465 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 HOXC10Q9NYD6 342 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 STAP2Q9UGK3 403 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 DOCK3Q8IZD9 2030 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 ROBO3Q96MS0 1386 aa30.15■■■□□ 2.42
VEGFA-230ENST00000640482 CAPN2P17655 700 aa30.14■■■□□ 2.42
VEGFA-230ENST00000640482 CYP2B6P20813 491 aa30.14■■■□□ 2.42
VEGFA-230ENST00000640482 ZMYM1Q5SVZ6 1142 aa30.14■■■□□ 2.42
VEGFA-230ENST00000640482 EPB41L4AQ9HCS5 686 aaPredicted RBP30.14■■■□□ 2.42
VEGFA-230ENST00000640482 MKI67P46013 3256 aaKnown RBP30.14■■■□□ 2.41
VEGFA-230ENST00000640482 SGPL1O95470 568 aa30.13■■■□□ 2.41
VEGFA-230ENST00000640482 XRCC5P13010 732 aaKnown RBP30.13■■■□□ 2.41
VEGFA-230ENST00000640482 PDE1AP54750 535 aa30.13■■■□□ 2.41
VEGFA-230ENST00000640482 ATP2B2Q01814 1243 aa30.13■■■□□ 2.41
VEGFA-230ENST00000640482 SEC62Q99442 399 aaKnown RBP30.13■■■□□ 2.41
VEGFA-230ENST00000640482 ZNF287Q9HBT7 754 aa30.13■■■□□ 2.41
VEGFA-230ENST00000640482 EEF2P13639 858 aaKnown RBP30.12■■■□□ 2.41
VEGFA-230ENST00000640482 TRMT44Q8IYL2 757 aaKnown RBP30.12■■■□□ 2.41
VEGFA-230ENST00000640482 IFNL3Q8IZI9 196 aa30.12■■■□□ 2.41
VEGFA-230ENST00000640482 EVI5LQ96CN4 794 aa30.12■■■□□ 2.41
VEGFA-230ENST00000640482 PAK6Q9NQU5 681 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-230ENST00000640482 BTBD7Q9P203 1132 aa30.12■■■□□ 2.41
VEGFA-230ENST00000640482 RGS2P41220 211 aa30.11■■■□□ 2.41
VEGFA-230ENST00000640482 KIAA1755Q5JYT7 1200 aa30.11■■■□□ 2.41
VEGFA-230ENST00000640482 SPICE1Q8N0Z3 855 aa30.11■■■□□ 2.41
VEGFA-230ENST00000640482 STK11IPQ8N1F8 1099 aa30.11■■■□□ 2.41
VEGFA-230ENST00000640482 PLXNB2O15031 1838 aa30.1■■■□□ 2.41
VEGFA-230ENST00000640482 WDR46O15213 610 aaKnown RBP30.1■■■□□ 2.41
VEGFA-230ENST00000640482 RASA1P20936 1047 aa30.1■■■□□ 2.41
VEGFA-230ENST00000640482 MORN1Q5T089 497 aa30.1■■■□□ 2.41
VEGFA-230ENST00000640482 WDR78Q5VTH9 848 aa30.1■■■□□ 2.41
VEGFA-230ENST00000640482 TRIB2Q92519 343 aa30.1■■■□□ 2.41
VEGFA-230ENST00000640482 USP6NLQ92738 828 aa30.1■■■□□ 2.41
VEGFA-230ENST00000640482 DEFB118Q96PH6 123 aa30.1■■■□□ 2.41
VEGFA-230ENST00000640482 GOPCQ9HD26 462 aa30.1■■■□□ 2.41
VEGFA-230ENST00000640482 SMC5Q8IY18 1101 aa30.09■■■□□ 2.41
VEGFA-230ENST00000640482 MB21D1Q8N884 522 aa30.09■■■□□ 2.41
VEGFA-230ENST00000640482 EXOC6Q8TAG9 804 aa30.09■■■□□ 2.41
VEGFA-230ENST00000640482 LNPKQ9C0E8 428 aa30.09■■■□□ 2.41
VEGFA-230ENST00000640482 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.09■■■□□ 2.413e-7■■■■□ 25.4
VEGFA-230ENST00000640482 RPTORQ8N122 1335 aa30.08■■■□□ 2.41
VEGFA-230ENST00000640482 FLOT1O75955 427 aa30.08■■■□□ 2.41
VEGFA-230ENST00000640482 TFRCP02786 760 aaKnown RBP30.08■■■□□ 2.41
VEGFA-230ENST00000640482 ZKSCAN1P17029 563 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-230ENST00000640482 DSG3P32926 999 aa30.08■■■□□ 2.41
VEGFA-230ENST00000640482 APBA2Q99767 749 aa30.08■■■□□ 2.41
VEGFA-230ENST00000640482 NAPBQ9H115 298 aa30.08■■■□□ 2.41
VEGFA-230ENST00000640482 HMX1Q9NP08 348 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-230ENST00000640482 IVNS1ABPQ9Y6Y0 642 aa30.08■■■□□ 2.41
VEGFA-230ENST00000640482 ZNF444Q8N0Y2 327 aaPredicted RBP30.07■■■□□ 2.4
VEGFA-230ENST00000640482 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.07■■■□□ 2.4
VEGFA-230ENST00000640482 SLC15A5A6NIM6 579 aa30.06■■■□□ 2.4
VEGFA-230ENST00000640482 FARP2O94887 1054 aaPredicted RBP30.06■■■□□ 2.4
VEGFA-230ENST00000640482 SLC3A2P08195 630 aaKnown RBP30.06■■■□□ 2.4
VEGFA-230ENST00000640482 TRIM32Q13049 653 aa30.06■■■□□ 2.4
VEGFA-230ENST00000640482 MAP2K5Q13163 448 aa30.06■■■□□ 2.4
VEGFA-230ENST00000640482 PTPREP23469 700 aa30.05■■■□□ 2.4
VEGFA-230ENST00000640482 PDE4BQ07343 736 aa30.05■■■□□ 2.4
VEGFA-230ENST00000640482 B4GALNT3Q6L9W6 998 aa30.05■■■□□ 2.4
VEGFA-230ENST00000640482 UBE2Q1Q7Z7E8 422 aa30.05■■■□□ 2.4
VEGFA-230ENST00000640482 TICAM2Q86XR7 235 aa30.05■■■□□ 2.4
VEGFA-230ENST00000640482 SPATC1LQ9H0A9 340 aa30.05■■■□□ 2.4
VEGFA-230ENST00000640482 NYAP2Q9P242 653 aa30.05■■■□□ 2.4
VEGFA-230ENST00000640482 RAD21O60216 631 aa30.04■■■□□ 2.4
VEGFA-230ENST00000640482 CRISPLD2Q9H0B8 497 aa30.04■■■□□ 2.4
VEGFA-230ENST00000640482 GREB1LQ9C091 1923 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-230ENST00000640482 PRDM1O75626 825 aa30.03■■■□□ 2.4
VEGFA-230ENST00000640482 PRKAR2AP13861 404 aaKnown RBP30.03■■■□□ 2.4
VEGFA-230ENST00000640482 MAP3K21Q5TCX8 1036 aa30.03■■■□□ 2.4
VEGFA-230ENST00000640482 SAMD1Q6SPF0 538 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-230ENST00000640482 SHCBP1Q8NEM2 672 aa30.03■■■□□ 2.4
VEGFA-230ENST00000640482 ATG4CQ96DT6 458 aa30.03■■■□□ 2.4
VEGFA-230ENST00000640482 HTATIP2Q9BUP3 242 aa30.03■■■□□ 2.4
VEGFA-230ENST00000640482 MOV10L1Q9BXT6 1211 aaKnown RBP30.03■■■□□ 2.4
VEGFA-230ENST00000640482 HELLSQ9NRZ9 838 aa30.03■■■□□ 2.4
VEGFA-230ENST00000640482 SUPT16HQ9Y5B9 1047 aaKnown RBP30.03■■■□□ 2.4
VEGFA-230ENST00000640482 A0A0G2JMZ2 1700 aa30.02■■■□□ 2.4
VEGFA-230ENST00000640482 IGHDP01880 384 aa30.02■■■□□ 2.4
VEGFA-230ENST00000640482 PPARAQ07869 468 aa30.02■■■□□ 2.4
VEGFA-230ENST00000640482 GRB14Q14449 540 aa30.02■■■□□ 2.4
VEGFA-230ENST00000640482 CCDC129Q6ZRS4 1044 aa30.02■■■□□ 2.4
VEGFA-230ENST00000640482 CHD1LQ86WJ1 897 aa30.02■■■□□ 2.4
VEGFA-230ENST00000640482 PLS1Q14651 629 aa30.01■■■□□ 2.39
VEGFA-230ENST00000640482 CCL14Q16627 93 aa30.01■■■□□ 2.39
VEGFA-230ENST00000640482 RLFQ13129 1914 aa30■■■□□ 2.39
VEGFA-230ENST00000640482 IGKV6D-41A0A0C4DH26 115 aa30■■■□□ 2.39
VEGFA-230ENST00000640482 TRIM6-TRIM34B2RNG4 842 aa30■■■□□ 2.39
VEGFA-230ENST00000640482 NUCB1Q02818 461 aa30■■■□□ 2.39
VEGFA-230ENST00000640482 DPF3Q92784 378 aa30■■■□□ 2.39
VEGFA-230ENST00000640482 CLIP2Q9UDT6 1046 aa30■■■□□ 2.39
VEGFA-230ENST00000640482 STRNO43815 780 aa29.99■■■□□ 2.39
VEGFA-230ENST00000640482 HOXC6P09630 235 aa29.99■■■□□ 2.39
VEGFA-230ENST00000640482 TSPY3P0CV98 308 aa29.99■■■□□ 2.39
VEGFA-230ENST00000640482 TSPY8P0CW00 308 aa29.99■■■□□ 2.39
VEGFA-230ENST00000640482 ERCC3P19447 782 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms