RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ACTR10Q9NZ32 417 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 PCOLCE2Q9UKZ9 415 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 PCDHB5Q9Y5E4 795 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 FAM221AA4D161 298 aa9.06□□□□□ -0.96
RFC1-217ENST00000639695 FAM221BA6H8Z2 402 aa9.06□□□□□ -0.96
RFC1-217ENST00000639695 FBLN7Q53RD9 439 aa9.06□□□□□ -0.96
RFC1-217ENST00000639695 TAF7LQ5H9L4 462 aa9.06□□□□□ -0.96
RFC1-217ENST00000639695 MKNK2Q9HBH9 465 aa9.06□□□□□ -0.96
RFC1-217ENST00000639695 CBX8Q9HC52 389 aa9.06□□□□□ -0.96
RFC1-217ENST00000639695 BMP6P22004 513 aa9.05□□□□□ -0.96
RFC1-217ENST00000639695 FXNQ16595 210 aa9.05□□□□□ -0.96
RFC1-217ENST00000639695 SCARA3Q6AZY7 606 aa9.05□□□□□ -0.96
RFC1-217ENST00000639695 LLGL2Q6P1M3 1020 aa9.05□□□□□ -0.96
RFC1-217ENST00000639695 MPRIPQ6WCQ1 1025 aa9.05□□□□□ -0.96
RFC1-217ENST00000639695 UBE3DQ7Z6J8 389 aa9.05□□□□□ -0.96
RFC1-217ENST00000639695 TNKS2Q9H2K2 1166 aa9.05□□□□□ -0.96
RFC1-217ENST00000639695 NOP58Q9Y2X3 529 aaKnown RBP9.05□□□□□ -0.96
RFC1-217ENST00000639695 CILPO75339 1184 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 CDC45O75419 566 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 ARNTP27540 789 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 DDR2Q16832 855 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 PLEKHG4Q58EX7 1191 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
RFC1-217ENST00000639695 GK5Q6ZS86 529 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 ARHGAP27Q6ZUM4 889 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 REC114Q7Z4M0 266 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 APPBP2Q92624 585 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 DNAJC7Q99615 494 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 BRMS1Q9HCU9 246 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 MSRB2Q9Y3D2 182 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 PRKAB1Q9Y478 270 aa9.04□□□□□ -0.96
RFC1-217ENST00000639695 TMEM265A0A087WTH1 108 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 PDPK1O15530 556 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 DNAJC6O75061 913 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 SEPT6Q14141 434 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 ANGEL2Q5VTE6 544 aaKnown RBP9.03□□□□□ -0.96
RFC1-217ENST00000639695 FILIP1Q7Z7B0 1213 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 HOMER1Q86YM7 354 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 CILP2Q8IUL8 1156 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 KSR1Q8IVT5 923 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
RFC1-217ENST00000639695 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 GPATCH3Q96I76 525 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 SPC25Q9HBM1 224 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 ZNRF3Q9ULT6 936 aa9.03□□□□□ -0.96
RFC1-217ENST00000639695 ZNF503-AS2A6NEH8 195 aa9.02□□□□□ -0.97
RFC1-217ENST00000639695 TRIM37O94972 964 aa9.02□□□□□ -0.97
RFC1-217ENST00000639695 RASGRF1Q13972 1273 aa9.02□□□□□ -0.97
RFC1-217ENST00000639695 SLC23A3Q6PIS1 610 aa9.02□□□□□ -0.97
RFC1-217ENST00000639695 CELF2-AS1Q8N7Q2 184 aa9.02□□□□□ -0.97
RFC1-217ENST00000639695 RBBP8NLQ8NC74 664 aaPredicted RBP9.02□□□□□ -0.97
RFC1-217ENST00000639695 FLAD1Q8NFF5 587 aa9.02□□□□□ -0.97
RFC1-217ENST00000639695 FANCLQ9NW38 375 aa9.02□□□□□ -0.97
RFC1-217ENST00000639695 IFT57Q9NWB7 429 aa9.02□□□□□ -0.97
RFC1-217ENST00000639695 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.01□□□□□ -0.97
RFC1-217ENST00000639695 NTF4P34130 210 aa9.01□□□□□ -0.97
RFC1-217ENST00000639695 RPL6Q02878 288 aaKnown RBP9.01□□□□□ -0.97
RFC1-217ENST00000639695 PPP2R5EQ16537 467 aa9.01□□□□□ -0.97
RFC1-217ENST00000639695 ARSHQ5FYA8 562 aa9.01□□□□□ -0.97
RFC1-217ENST00000639695 LARP1BQ659C4 914 aaKnown RBP9.01□□□□□ -0.97
RFC1-217ENST00000639695 MAP1SQ66K74 1059 aaPredicted RBP9.01□□□□□ -0.97
RFC1-217ENST00000639695 SPACA3Q8IXA5 215 aa9.01□□□□□ -0.97
RFC1-217ENST00000639695 RNF214Q8ND24 703 aa9.01□□□□□ -0.97
RFC1-217ENST00000639695 GPBAR1Q8TDU6 330 aa9.01□□□□□ -0.97
RFC1-217ENST00000639695 SSU72Q9NP77 194 aaKnown RBP9.01□□□□□ -0.97
RFC1-217ENST00000639695 MAPK8IP1Q9UQF2 711 aa9.01□□□□□ -0.97
RFC1-217ENST00000639695 CASP7P55210 303 aa9□□□□□ -0.97
RFC1-217ENST00000639695 CLCQ05315 142 aa9□□□□□ -0.97
RFC1-217ENST00000639695 LRRFIP1Q32MZ4 808 aaKnown RBP9□□□□□ -0.97
RFC1-217ENST00000639695 EHMT1Q9H9B1 1298 aa9□□□□□ -0.97
RFC1-217ENST00000639695 METTL14Q9HCE5 456 aaKnown RBP9□□□□□ -0.97
RFC1-217ENST00000639695 PCDHB14Q9Y5E9 798 aa9□□□□□ -0.97
RFC1-217ENST00000639695 COL4A3BPQ9Y5P4 624 aa9□□□□□ -0.97
RFC1-217ENST00000639695 CSADQ9Y600 493 aa9□□□□□ -0.97
RFC1-217ENST00000639695 LRRC10BA6NIK2 292 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 RBAK-RBAKDNI3L0D1 243 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 ERVK-24P63145 666 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 ZNF252P-AS1Q0IIN9 211 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 PKN1Q16512 942 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 RASIP1Q5U651 963 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 FYB2Q5VWT5 728 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 ZSWIM9Q86XI8 627 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 LILRB2Q8N423 598 aa8.99□□□□□ -0.97
RFC1-217ENST00000639695 RAB11FIP3O75154 756 aa8.98□□□□□ -0.97
RFC1-217ENST00000639695 DDAH1O94760 285 aa8.98□□□□□ -0.97
RFC1-217ENST00000639695 MLECQ14165 292 aa8.98□□□□□ -0.97
RFC1-217ENST00000639695 NKPD1Q17RQ9 610 aa8.98□□□□□ -0.97
RFC1-217ENST00000639695 MTERF2Q49AM1 385 aa8.98□□□□□ -0.97
RFC1-217ENST00000639695 PPM1JQ5JR12 505 aa8.98□□□□□ -0.97
RFC1-217ENST00000639695 LSRQ86X29 649 aaPredicted RBP8.98□□□□□ -0.97
RFC1-217ENST00000639695 GRIN3AQ8TCU5 1115 aa8.98□□□□□ -0.97
RFC1-217ENST00000639695 LIN37Q96GY3 246 aaPredicted RBP8.98□□□□□ -0.97
RFC1-217ENST00000639695 CACNA2D2Q9NY47 1150 aa8.98□□□□□ -0.97
RFC1-217ENST00000639695 ATE1O95260 518 aa8.97□□□□□ -0.97
RFC1-217ENST00000639695 HNRNPUQ00839 825 aaKnown RBP eCLIP8.97□□□□□ -0.97
RFC1-217ENST00000639695 ZP2Q05996 745 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms