RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
SSBP4-215ENST00000625926 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 ZMYM1Q5SVZ6 1142 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 MORN1Q5T089 497 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
SSBP4-215ENST00000625926 IFNL3Q8IZI9 196 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 SEC62Q99442 399 aaKnown RBP12.96□□□□□ -0.33
SSBP4-215ENST00000625926 NACAP1Q9BZK3 213 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 VCPKMTQ9H867 229 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
SSBP4-215ENST00000625926 PAK6Q9NQU5 681 aaPredicted RBP12.96□□□□□ -0.33
SSBP4-215ENST00000625926 BTBD7Q9P203 1132 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 COL6A3P12111 3177 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 RPTORQ8N122 1335 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 PDE1AP54750 535 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 KIAA1755Q5JYT7 1200 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 SPICE1Q8N0Z3 855 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 STK11IPQ8N1F8 1099 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 TRIB2Q92519 343 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 USP6NLQ92738 828 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 EVI5LQ96CN4 794 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.95□□□□□ -0.345e-6■■■□□ 19.2
SSBP4-215ENST00000625926 EPB41L4AQ9HCS5 686 aaPredicted RBP12.95□□□□□ -0.34
SSBP4-215ENST00000625926 PHIPQ8WWQ0 1821 aa12.95□□□□□ -0.34
SSBP4-215ENST00000625926 SLC15A5A6NIM6 579 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 WDR46O15213 610 aaKnown RBP12.94□□□□□ -0.34
SSBP4-215ENST00000625926 FLOT1O75955 427 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
SSBP4-215ENST00000625926 RASA1P20936 1047 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 PTPREP23469 700 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 DSG3P32926 999 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 TRIM32Q13049 653 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 UBE2Q1Q7Z7E8 422 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 ZNF444Q8N0Y2 327 aaPredicted RBP12.94□□□□□ -0.34
SSBP4-215ENST00000625926 MB21D1Q8N884 522 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.94□□□□□ -0.34
SSBP4-215ENST00000625926 GOPCQ9HD26 462 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
SSBP4-215ENST00000625926 ZSWIM8A7E2V4 1837 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 FARP2O94887 1054 aaPredicted RBP12.93□□□□□ -0.34
SSBP4-215ENST00000625926 SLC3A2P08195 630 aaKnown RBP12.93□□□□□ -0.34
SSBP4-215ENST00000625926 MAP2K5Q13163 448 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 MAP3K21Q5TCX8 1036 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 EXOC6Q8TAG9 804 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 DPF3Q92784 378 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 APBA2Q99767 749 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 HTATIP2Q9BUP3 242 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 MOV10L1Q9BXT6 1211 aaKnown RBP12.93□□□□□ -0.34
SSBP4-215ENST00000625926 SPATC1LQ9H0A9 340 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 CRISPLD2Q9H0B8 497 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 NAPBQ9H115 298 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 NYAP2Q9P242 653 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 LOC285556D6RIA3 1793 aa12.93□□□□□ -0.34
SSBP4-215ENST00000625926 STRNO43815 780 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 RAD21O60216 631 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 PRDM1O75626 825 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
SSBP4-215ENST00000625926 PDE4BQ07343 736 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 B4GALNT3Q6L9W6 998 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 TICAM2Q86XR7 235 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 SHCBP1Q8NEM2 672 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 ATG4CQ96DT6 458 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 LNPKQ9C0E8 428 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 FOCADQ5VW36 1801 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 HTTP42858 3142 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
SSBP4-215ENST00000625926 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
SSBP4-215ENST00000625926 IGHDP01880 384 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 HOXC6P09630 235 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 ERCC3P19447 782 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 PPARAQ07869 468 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 CACNB2Q08289 660 aaPredicted RBP12.91□□□□□ -0.34
SSBP4-215ENST00000625926 GRB14Q14449 540 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 PLS1Q14651 629 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 CCL14Q16627 93 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
SSBP4-215ENST00000625926 ANKLE1Q8NAG6 615 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 MROH8Q9H579 483 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 HELLSQ9NRZ9 838 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 CLIP2Q9UDT6 1046 aa12.91□□□□□ -0.34
SSBP4-215ENST00000625926 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
SSBP4-215ENST00000625926 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 F5H6K3 240 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 KLRC3Q07444 240 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 CCDC129Q6ZRS4 1044 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 NECAB2Q7Z6G3 386 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 DPP9Q86TI2 863 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 CHD1LQ86WJ1 897 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 NCAPG2Q86XI2 1143 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 MKL1Q969V6 931 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 ADAMTS5Q9UNA0 930 aa12.9□□□□□ -0.34
SSBP4-215ENST00000625926 SUPT16HQ9Y5B9 1047 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms