RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GRB14Q14449 540 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 FAM109BQ6ICB4 259 aaPredicted RBP9.52□□□□□ -0.89
CLK1-215ENST00000621181 DPP9Q86TI2 863 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 TTC6Q86TZ1 520 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 MAGEB6Q8N7X4 407 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 ACER1Q8TDN7 264 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 GUCD1Q96NT3 240 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 EHD4Q9H223 541 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 RPAP3Q9H6T3 665 aaPredicted RBP9.52□□□□□ -0.89
CLK1-215ENST00000621181 BTBD7Q9P203 1132 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 ATP11BQ9Y2G3 1177 aa9.52□□□□□ -0.89
CLK1-215ENST00000621181 SPDYE16A6NNV3 312 aaPredicted RBP9.51□□□□□ -0.89
CLK1-215ENST00000621181 BCAR3O75815 825 aa9.51□□□□□ -0.89
CLK1-215ENST00000621181 RTP1P59025 263 aa9.51□□□□□ -0.89
CLK1-215ENST00000621181 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
CLK1-215ENST00000621181 LBX2Q6XYB7 198 aa9.51□□□□□ -0.89
CLK1-215ENST00000621181 NPLOC4Q8TAT6 608 aa9.51□□□□□ -0.89
CLK1-215ENST00000621181 SSH3Q8TE77 659 aa9.51□□□□□ -0.89
CLK1-215ENST00000621181 PRDM5Q9NQX1 630 aaPredicted RBP9.51□□□□□ -0.89
CLK1-215ENST00000621181 TLR7Q9NYK1 1049 aaKnown RBP9.51□□□□□ -0.89
CLK1-215ENST00000621181 DBNLQ9UJU6 430 aaKnown RBP9.51□□□□□ -0.89
CLK1-215ENST00000621181 KBTBD13C9JR72 458 aa9.5□□□□□ -0.89
CLK1-215ENST00000621181 POLR3DP05423 398 aaPredicted RBP9.5□□□□□ -0.89
CLK1-215ENST00000621181 CYBAP13498 195 aa9.5□□□□□ -0.89
CLK1-215ENST00000621181 ADORA2AP29274 412 aa9.5□□□□□ -0.89
CLK1-215ENST00000621181 GJC2Q5T442 439 aaPredicted RBP9.5□□□□□ -0.89
CLK1-215ENST00000621181 IFNLR1Q8IU57 520 aaPredicted RBP9.5□□□□□ -0.89
CLK1-215ENST00000621181 TMEM57Q8N5G2 664 aa9.5□□□□□ -0.89
CLK1-215ENST00000621181 ARRDC4Q8NCT1 418 aa9.5□□□□□ -0.89
CLK1-215ENST00000621181 TANGO6Q9C0B7 1094 aa9.5□□□□□ -0.89
CLK1-215ENST00000621181 CCDC8Q9H0W5 538 aaPredicted RBP9.5□□□□□ -0.89
CLK1-215ENST00000621181 MPHOSPH10O00566 681 aaKnown RBP9.49□□□□□ -0.89
CLK1-215ENST00000621181 STRNO43815 780 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 PLCD1P51178 756 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 ATP8B2P98198 1209 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 ANO1Q5XXA6 986 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 TRPV1Q8NER1 839 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 C1orf115Q9H7X2 142 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 SLC5A4Q9NY91 659 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 SHMT1P34896 483 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 PLS1Q14651 629 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 COG2Q14746 738 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 SEPT2Q15019 361 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 ZKSCAN2Q63HK3 967 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 OLFML2BQ68BL8 750 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 FTSJ3Q8IY81 847 aaKnown RBP9.49□□□□□ -0.89
CLK1-215ENST00000621181 EAF2Q96CJ1 260 aaPredicted RBP9.49□□□□□ -0.89
CLK1-215ENST00000621181 MOV10L1Q9BXT6 1211 aaKnown RBP9.49□□□□□ -0.89
CLK1-215ENST00000621181 SPATC1LQ9H0A9 340 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 ANTXR1Q9H6X2 564 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 HOXC10Q9NYD6 342 aa9.49□□□□□ -0.89
CLK1-215ENST00000621181 SEPT4O43236 478 aa9.48□□□□□ -0.89
CLK1-215ENST00000621181 ERCC3P19447 782 aa9.48□□□□□ -0.89
CLK1-215ENST00000621181 SHHQ15465 462 aa9.48□□□□□ -0.89
CLK1-215ENST00000621181 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
CLK1-215ENST00000621181 TMED8Q6PL24 325 aaPredicted RBP9.48□□□□□ -0.89
CLK1-215ENST00000621181 SLC39A5Q6ZMH5 540 aa9.48□□□□□ -0.89
CLK1-215ENST00000621181 MCM9Q9NXL9 1143 aa9.48□□□□□ -0.89
CLK1-215ENST00000621181 LTBP2Q14767 1821 aa9.48□□□□□ -0.89
CLK1-215ENST00000621181 RLFQ13129 1914 aa9.48□□□□□ -0.89
CLK1-215ENST00000621181 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 GUCY1A2P33402 732 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 TRIM60Q495X7 471 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 C9orf50Q5SZB4 431 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 NCAPG2Q86XI2 1143 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 ITPRIPQ8IWB1 547 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 MB21D1Q8N884 522 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 MAFAQ8NHW3 353 aaPredicted RBP9.47□□□□□ -0.89
CLK1-215ENST00000621181 BADQ92934 168 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 FERMT2Q96AC1 680 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 CDX2Q99626 313 aaPredicted RBP9.47□□□□□ -0.89
CLK1-215ENST00000621181 NOP58Q9Y2X3 529 aaKnown RBP9.47□□□□□ -0.89
CLK1-215ENST00000621181 MUC3AQ02505 3323 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 A0A1W2PRG0 241 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 HAX1O00165 279 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 FLOT1O75955 427 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 ADCYAP1R1P41586 468 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 EVX2Q03828 476 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 GABPAQ06546 454 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 AACSQ86V21 672 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 SPICE1Q8N0Z3 855 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 SHCBP1Q8NEM2 672 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 RIOK1Q9BRS2 568 aaKnown RBP9.47□□□□□ -0.89
CLK1-215ENST00000621181 CRNKL1Q9BZJ0 848 aaKnown RBP9.47□□□□□ -0.89
CLK1-215ENST00000621181 SEMA6BQ9H3T3 888 aa9.47□□□□□ -0.89
CLK1-215ENST00000621181 ZNF236Q9UL36 1845 aa9.46□□□□□ -0.89
CLK1-215ENST00000621181 COBLO75128 1261 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 IGHA2P01877 340 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 SNX17Q15036 470 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 LRRC41Q15345 812 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 TTF1Q15361 905 aaPredicted RBP9.46□□□□□ -0.9
CLK1-215ENST00000621181 FAM47AQ5JRC9 791 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 PRAMEF19Q5SWL8 479 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 SLC9C2Q5TAH2 1124 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 TMEM179Q6ZVK1 233 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 ABRAQ8N0Z2 381 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 MROH8Q9H579 483 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 PDLIM7Q9NR12 457 aa9.46□□□□□ -0.9
CLK1-215ENST00000621181 NAV1Q8NEY1 1877 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms