RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 SHMT1P34896 483 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 SNX17Q15036 470 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 PRAMEF19Q5SWL8 479 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 MAGEB6Q8N7X4 407 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 TRIM43Q96BQ3 446 aaPredicted RBP17.8■□□□□ 0.44
TMCO3-209ENST00000619336 ZNF512BQ96KM6 892 aaPredicted RBP17.8■□□□□ 0.44
TMCO3-209ENST00000619336 DBNLQ9UJU6 430 aaKnown RBP17.8■□□□□ 0.44
TMCO3-209ENST00000619336 COBLO75128 1261 aa17.79■□□□□ 0.44
TMCO3-209ENST00000619336 ERCC3P19447 782 aa17.79■□□□□ 0.44
TMCO3-209ENST00000619336 PLCD1P51178 756 aa17.79■□□□□ 0.44
TMCO3-209ENST00000619336 SEPT2Q15019 361 aa17.79■□□□□ 0.44
TMCO3-209ENST00000619336 TTC6Q86TZ1 520 aa17.79■□□□□ 0.44
TMCO3-209ENST00000619336 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
TMCO3-209ENST00000619336 TANGO6Q9C0B7 1094 aa17.79■□□□□ 0.44
TMCO3-209ENST00000619336 POLA2Q14181 598 aa17.78■□□□□ 0.44
TMCO3-209ENST00000619336 LRRC41Q15345 812 aa17.78■□□□□ 0.44
TMCO3-209ENST00000619336 FAM47AQ5JRC9 791 aa17.78■□□□□ 0.44
TMCO3-209ENST00000619336 FRAT1Q92837 279 aaPredicted RBP17.78■□□□□ 0.44
TMCO3-209ENST00000619336 SPATC1LQ9H0A9 340 aa17.78■□□□□ 0.44
TMCO3-209ENST00000619336 CCDC8Q9H0W5 538 aaPredicted RBP17.78■□□□□ 0.44
TMCO3-209ENST00000619336 A0A1W2PRG0 241 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 STRNO43815 780 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 IGSF3O75054 1194 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 SURF6O75683 361 aaKnown RBP17.77■□□□□ 0.44
TMCO3-209ENST00000619336 ITGB8P26012 769 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 EVX2Q03828 476 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 TLE2Q04725 743 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 PLS1Q14651 629 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 COG2Q14746 738 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 CERS3Q8IU89 383 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 RNPC3Q96LT9 517 aaKnown RBP17.77■□□□□ 0.44
TMCO3-209ENST00000619336 ANTXR1Q9H6X2 564 aa17.77■□□□□ 0.44
TMCO3-209ENST00000619336 SMCHD1A6NHR9 2005 aa17.77■□□□□ 0.43
TMCO3-209ENST00000619336 ZNFX1Q9P2E3 1918 aaKnown RBP17.76■□□□□ 0.43
TMCO3-209ENST00000619336 MPHOSPH10O00566 681 aaKnown RBP17.76■□□□□ 0.43
TMCO3-209ENST00000619336 IPO8O15397 1037 aaKnown RBP17.76■□□□□ 0.43
TMCO3-209ENST00000619336 BCAR3O75815 825 aa17.76■□□□□ 0.43
TMCO3-209ENST00000619336 EPHB4P54760 987 aa17.76■□□□□ 0.43
TMCO3-209ENST00000619336 KIAA1755Q5JYT7 1200 aa17.76■□□□□ 0.43
TMCO3-209ENST00000619336 NCAPG2Q86XI2 1143 aa17.76■□□□□ 0.43
TMCO3-209ENST00000619336 SHCBP1Q8NEM2 672 aa17.76■□□□□ 0.43
TMCO3-209ENST00000619336 HOXC10Q9NYD6 342 aa17.76■□□□□ 0.43
TMCO3-209ENST00000619336 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
TMCO3-209ENST00000619336 C1orf53Q5VUE5 145 aa17.75■□□□□ 0.43
TMCO3-209ENST00000619336 SSH3Q8TE77 659 aa17.75■□□□□ 0.43
TMCO3-209ENST00000619336 MAML3Q96JK9 1138 aa17.75■□□□□ 0.43
TMCO3-209ENST00000619336 C1orf115Q9H7X2 142 aa17.75■□□□□ 0.43
TMCO3-209ENST00000619336 SLC5A4Q9NY91 659 aa17.75■□□□□ 0.43
TMCO3-209ENST00000619336 PARP14Q460N5 1801 aa17.75■□□□□ 0.43
TMCO3-209ENST00000619336 CLTBP09497 229 aa17.74■□□□□ 0.43
TMCO3-209ENST00000619336 GABPAQ06546 454 aa17.74■□□□□ 0.43
TMCO3-209ENST00000619336 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
TMCO3-209ENST00000619336 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
TMCO3-209ENST00000619336 USP38Q8NB14 1042 aa17.74■□□□□ 0.43
TMCO3-209ENST00000619336 SYMPKQ92797 1274 aaKnown RBP17.74■□□□□ 0.43
TMCO3-209ENST00000619336 EAF2Q96CJ1 260 aaPredicted RBP17.74■□□□□ 0.43
TMCO3-209ENST00000619336 XPNPEP3Q9NQH7 507 aa17.74■□□□□ 0.43
TMCO3-209ENST00000619336 PHF24Q9UPV7 400 aa17.74■□□□□ 0.43
TMCO3-209ENST00000619336 COL11A1P12107 1806 aaPredicted RBP17.74■□□□□ 0.43
TMCO3-209ENST00000619336 MYH8P13535 1937 aa17.74■□□□□ 0.43
TMCO3-209ENST00000619336 MUC3AQ02505 3323 aa17.74■□□□□ 0.43
TMCO3-209ENST00000619336 DSG3P32926 999 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 ATP8B2P98198 1209 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 MAP3K12Q12852 859 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 GRIN2CQ14957 1233 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 MB21D1Q8N884 522 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 ATG4CQ96DT6 458 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 RIOK1Q9BRS2 568 aaKnown RBP17.73■□□□□ 0.43
TMCO3-209ENST00000619336 MROH8Q9H579 483 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 TACC3Q9Y6A5 838 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 PLXNA1Q9UIW2 1896 aa17.73■□□□□ 0.43
TMCO3-209ENST00000619336 TMEM265A0A087WTH1 108 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 PQBP1O60828 265 aaKnown RBP17.72■□□□□ 0.43
TMCO3-209ENST00000619336 FLOT1O75955 427 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 PGK1P00558 417 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 RARBP10826 455 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 RAG1P15918 1043 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 CLEC10AQ8IUN9 316 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 SPICE1Q8N0Z3 855 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 SLC44A5Q8NCS7 719 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
TMCO3-209ENST00000619336 MAGEB6P1A0A0J9YX57 407 aa17.71■□□□□ 0.43
TMCO3-209ENST00000619336 FCER1AP12319 257 aa17.71■□□□□ 0.43
TMCO3-209ENST00000619336 LENG1Q96BZ8 264 aaPredicted RBP17.71■□□□□ 0.43
TMCO3-209ENST00000619336 NOP58Q9Y2X3 529 aaKnown RBP17.71■□□□□ 0.43
TMCO3-209ENST00000619336 A0A1W2PQ45 241 aaPredicted RBP17.7■□□□□ 0.42
TMCO3-209ENST00000619336 A0A1W2PQY0 241 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 KIAA0355O15063 1070 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 PGK2P07205 417 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 CYP2D6P10635 497 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 TAL1P17542 331 aaPredicted RBP17.7■□□□□ 0.42
TMCO3-209ENST00000619336 DNAJB2P25686 324 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 FPGSQ05932 587 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 TJAP1Q5JTD0 557 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 RNF180Q86T96 592 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 CRNKL1Q9BZJ0 848 aaKnown RBP17.7■□□□□ 0.42
TMCO3-209ENST00000619336 TMEM39AQ9NV64 488 aa17.7■□□□□ 0.42
TMCO3-209ENST00000619336 TMEM132BQ14DG7 1078 aa17.69■□□□□ 0.42
TMCO3-209ENST00000619336 TMEM179Q6ZVK1 233 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms