RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 SMIM5Q71RC9 77 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 CREBRFQ8IUR6 639 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 SRBD1Q8N5C6 995 aaKnown RBP13.4□□□□□ -0.26
C11orf54-215ENST00000617482 KIFC2Q96AC6 838 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 FAM84BQ96KN1 310 aaPredicted RBP13.4□□□□□ -0.26
C11orf54-215ENST00000617482 RBM28Q9NW13 759 aaKnown RBP13.4□□□□□ -0.26
C11orf54-215ENST00000617482 PPP1R3GB7ZBB8 358 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 ADAMTS3O15072 1205 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 PPP2R3AQ06190 1150 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 TEX35Q5T0J7 233 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 RAD9BQ6WBX8 426 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 BICDL1Q6ZP65 573 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 PIK3AP1Q6ZUJ8 805 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 CCDC12Q8WUD4 166 aaPredicted RBP13.4□□□□□ -0.26
C11orf54-215ENST00000617482 GSDMAQ96QA5 445 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 ADD3Q9UEY8 706 aaKnown RBP13.4□□□□□ -0.26
C11orf54-215ENST00000617482 MRFAP1Q9Y605 127 aa13.4□□□□□ -0.26
C11orf54-215ENST00000617482 ARAP2Q8WZ64 1704 aa13.4□□□□□ -0.27
C11orf54-215ENST00000617482 COL1A1P02452 1464 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-215ENST00000617482 ZRANB2O95218 330 aaKnown RBP eCLIP13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CCDC175P0C221 793 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 KLRK1P26718 216 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 MCM7P33993 719 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CCT6AP40227 531 aaKnown RBP13.39□□□□□ -0.27
C11orf54-215ENST00000617482 PLA2G4AP47712 749 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 KCNQ4P56696 695 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 NLRP5P59047 1200 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 DDB1Q16531 1140 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 TNFRSF25Q93038 417 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 PANX2Q96RD6 677 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 BRIP1Q9BX63 1249 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 ZSWIM4Q9H7M6 989 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 MINPP1Q9UNW1 487 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CTNND2Q9UQB3 1225 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 COL4A1P02462 1669 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CALM1P0DP23 149 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CALM2P0DP24 149 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CALM3P0DP25 149 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CASP14P31944 242 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CTCFLQ8NI51 663 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-215ENST00000617482 CDC25AP30304 524 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 CDKAL1Q5VV42 579 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 CELF1Q92879 486 aaKnown RBP13.38□□□□□ -0.27
C11orf54-215ENST00000617482 BSDC1Q9NW68 430 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-215ENST00000617482 ADGRG1Q9Y653 693 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 XDHP47989 1333 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 BMP15O95972 392 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 CYP2D6P10635 497 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 GTF2E1P29083 439 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-215ENST00000617482 ATP2C1P98194 919 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-215ENST00000617482 MECOMQ03112 1051 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 IL17AQ16552 155 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 RRAGBQ5VZM2 374 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 MARCH10Q8NA82 808 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-215ENST00000617482 TFCP2L1Q9NZI6 479 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 MAPK8IP1Q9UQF2 711 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 JAG2Q9Y219 1238 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
C11orf54-215ENST00000617482 BAZ2BQ9UIF8 2168 aaKnown RBP13.37□□□□□ -0.27
C11orf54-215ENST00000617482 CNTNAP5Q8WYK1 1306 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 DDAH1O94760 285 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 TPM1P09493 284 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 PBX1P40424 430 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 FXR1P51114 621 aaKnown RBP eCLIP13.37□□□□□ -0.27
C11orf54-215ENST00000617482 IQUBQ8NA54 791 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 NSUN4Q96CB9 384 aaKnown RBP13.37□□□□□ -0.27
C11orf54-215ENST00000617482 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 MTRQ99707 1265 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 VPS16Q9H269 839 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 ZNF652Q9Y2D9 606 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 KCNQ2O43526 872 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 FGRP09769 529 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 SCG2P13521 617 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 CT47A1Q5JQC4 288 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-215ENST00000617482 PARD6BQ9BYG5 372 aa13.37□□□□□ -0.27
C11orf54-215ENST00000617482 DCP1AQ9NPI6 582 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-215ENST00000617482 MYH2Q9UKX2 1941 aa13.36□□□□□ -0.27
C11orf54-215ENST00000617482 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
C11orf54-215ENST00000617482 N4BP3O15049 544 aa13.36□□□□□ -0.27
C11orf54-215ENST00000617482 POLR3GO15318 223 aaPredicted RBP13.36□□□□□ -0.27
C11orf54-215ENST00000617482 MFAP3LO75121 409 aa13.36□□□□□ -0.27
C11orf54-215ENST00000617482 GYPCP04921 128 aa13.36□□□□□ -0.27
C11orf54-215ENST00000617482 KRT31Q15323 416 aa13.36□□□□□ -0.27
C11orf54-215ENST00000617482 E2F4Q16254 413 aa13.36□□□□□ -0.27
C11orf54-215ENST00000617482 GPR161Q8N6U8 529 aaKnown RBP13.36□□□□□ -0.27
C11orf54-215ENST00000617482 NUTM2BA6NNL0 878 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 NUTM2EB1AL46 878 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 SASH3O75995 380 aa13.35□□□□□ -0.27
C11orf54-215ENST00000617482 PRDX5P30044 214 aa13.35□□□□□ -0.27
C11orf54-215ENST00000617482 CC2D1AQ6P1N0 951 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
C11orf54-215ENST00000617482 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 COL16A1Q07092 1604 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms