RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CALML3P27482 149 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 EARS2Q5JPH6 523 aaKnown RBP18.02■□□□□ 0.47
NR1H3-235ENST00000616973 DRC7Q8IY82 874 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 NEDD1Q8NHV4 660 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 FERMT2Q96AC1 680 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 SPTLC3Q9NUV7 552 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 CLIP2Q9UDT6 1046 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 DAGLAQ9Y4D2 1042 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 USP17L3A6NCW0 530 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 USP17L4A6NCW7 530 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 FAM205CA6NFA0 338 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 NLRP5P59047 1200 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 GTF2IP78347 998 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 GRIN1Q05586 938 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 USP17L1Q7RTZ2 530 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 SLC44A5Q8NCS7 719 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 KIAA1524Q8TCG1 905 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 LZTS2Q9BRK4 669 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 MAD2L2Q9UI95 211 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
NR1H3-235ENST00000616973 BIN1O00499 593 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 PTGS1P23219 599 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 PNOCQ13519 176 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
NR1H3-235ENST00000616973 KANK3Q6NY19 840 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 CCDC186Q7Z3E2 898 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 MASTLQ96GX5 879 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 TMEM47Q9BQJ4 181 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 ZC3H12CQ9C0D7 883 aaKnown RBP18■□□□□ 0.47
NR1H3-235ENST00000616973 PALM3A6NDB9 673 aaPredicted RBP18■□□□□ 0.47
NR1H3-235ENST00000616973 NOVP48745 357 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 TPM4P67936 248 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 TTC38Q5R3I4 469 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 EYA3Q99504 573 aa18■□□□□ 0.47
NR1H3-235ENST00000616973 RIMBP2O15034 1052 aa17.99■□□□□ 0.47
NR1H3-235ENST00000616973 ATP2B1P20020 1258 aa17.99■□□□□ 0.47
NR1H3-235ENST00000616973 SPECC1Q5M775 1068 aa17.99■□□□□ 0.47
NR1H3-235ENST00000616973 STAG2Q8N3U4 1231 aa17.99■□□□□ 0.47
NR1H3-235ENST00000616973 CSRNP2Q9H175 543 aa17.99■□□□□ 0.47
NR1H3-235ENST00000616973 PLIN4Q96Q06 1357 aa17.99■□□□□ 0.47
NR1H3-235ENST00000616973 MMP10P09238 476 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 NCAPHQ15003 741 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 NT5DC1Q5TFE4 455 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 GALNT17Q6IS24 598 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 FBXW7Q969H0 707 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 PCDHA5Q9Y5H7 936 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 ZNF646O15015 1829 aaPredicted RBP17.98■□□□□ 0.47
NR1H3-235ENST00000616973 POLR2DO15514 142 aaKnown RBP17.98■□□□□ 0.47
NR1H3-235ENST00000616973 SMARCA1P28370 1054 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 ATP2C1P98194 919 aaPredicted RBP17.98■□□□□ 0.47
NR1H3-235ENST00000616973 POSTNQ15063 836 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 DPP8Q6V1X1 898 aaPredicted RBP17.98■□□□□ 0.47
NR1H3-235ENST00000616973 FOXP4Q8IVH2 680 aaPredicted RBP17.98■□□□□ 0.47
NR1H3-235ENST00000616973 DAGLBQ8NCG7 672 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 SERTAD1Q9UHV2 236 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 NRBP1Q9UHY1 535 aa17.98■□□□□ 0.47
NR1H3-235ENST00000616973 ACTN4O43707 911 aaKnown RBP17.97■□□□□ 0.47
NR1H3-235ENST00000616973 MYO1BO43795 1136 aa17.97■□□□□ 0.47
NR1H3-235ENST00000616973 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
NR1H3-235ENST00000616973 SARSP49591 514 aaKnown RBP17.97■□□□□ 0.47
NR1H3-235ENST00000616973 BLIDQ8IZY5 108 aa17.97■□□□□ 0.47
NR1H3-235ENST00000616973 CERS5Q8N5B7 392 aa17.97■□□□□ 0.47
NR1H3-235ENST00000616973 SPZ1Q9BXG8 430 aa17.97■□□□□ 0.47
NR1H3-235ENST00000616973 TMX4Q9H1E5 349 aaPredicted RBP17.97■□□□□ 0.47
NR1H3-235ENST00000616973 PYCARDQ9ULZ3 195 aa17.97■□□□□ 0.47
NR1H3-235ENST00000616973 PCDHA4Q9UN74 947 aa17.97■□□□□ 0.47
NR1H3-235ENST00000616973 NEMFO60524 1076 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 TOP1P11387 765 aaKnown RBP17.96■□□□□ 0.47
NR1H3-235ENST00000616973 TRIML1Q8N9V2 468 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 CCDC148Q8NFR7 591 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 CCDC34Q96HJ3 373 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 STX8Q9UNK0 236 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 M0R2N6 131 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 WNT7AO00755 349 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 GABPAQ06546 454 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 ZNF174Q15697 407 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 SLC35G1Q2M3R5 365 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 NOM1Q5C9Z4 860 aaKnown RBP17.96■□□□□ 0.47
NR1H3-235ENST00000616973 HHIPL2Q6UWX4 724 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 OLFM4Q6UX06 510 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.47
NR1H3-235ENST00000616973 GREB1LQ9C091 1923 aaPredicted RBP17.96■□□□□ 0.46
NR1H3-235ENST00000616973 CYTH3O43739 400 aa17.95■□□□□ 0.46
NR1H3-235ENST00000616973 CCDC144BQ3MJ40 725 aa17.95■□□□□ 0.46
NR1H3-235ENST00000616973 SPATA20Q8TB22 786 aa17.95■□□□□ 0.46
NR1H3-235ENST00000616973 IMPACTQ9P2X3 320 aa17.95■□□□□ 0.46
NR1H3-235ENST00000616973 EP400Q96L91 3159 aa17.95■□□□□ 0.46
NR1H3-235ENST00000616973 MYO3BQ8WXR4 1341 aa17.95■□□□□ 0.46
NR1H3-235ENST00000616973 SLX4Q8IY92 1834 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 FOXN1O15353 648 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 TPM2P07951 284 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 MYL5Q02045 173 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 PTGDRQ13258 359 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 USP49Q70CQ1 688 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 SMARCE1Q969G3 411 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 BARHL2Q9NY43 387 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 MAN1B1Q9UKM7 699 aa17.94■□□□□ 0.46
NR1H3-235ENST00000616973 TTF2Q9UNY4 1162 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms