RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 DUSP10Q9Y6W6 482 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 DLC1Q96QB1 1528 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 USP31Q70CQ4 1352 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 MINDY4BA8MYZ0 360 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 EYA2O00167 538 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 RPS6KA5O75582 802 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 NEBLO76041 1014 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 ERCC5P28715 1186 aaPredicted RBP7.49□□□□□ -1.21
LMO3-235ENST00000616247 RFX5P48382 616 aaPredicted RBP7.49□□□□□ -1.21
LMO3-235ENST00000616247 KIF5AQ12840 1032 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 TTF1Q15361 905 aaPredicted RBP7.49□□□□□ -1.21
LMO3-235ENST00000616247 SPA17Q15506 151 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 METTL24Q5JXM2 366 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 TBC1D10CQ8IV04 446 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 PIP4P2Q8N4L2 257 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 OR8K1Q8NGG5 319 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 HDAC7Q8WUI4 952 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 APPBP2Q92624 585 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 SYMPKQ92797 1274 aaKnown RBP7.49□□□□□ -1.21
LMO3-235ENST00000616247 N4BP2L2Q92802 583 aaPredicted RBP7.49□□□□□ -1.21
LMO3-235ENST00000616247 ARL8AQ96BM9 186 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 TRIM47Q96LD4 638 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 MAP3K14Q99558 947 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.49□□□□□ -1.21
LMO3-235ENST00000616247 NBPF3Q9H094 633 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 TTC26A0AVF1 554 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 ESYT3A0FGR9 886 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 KCNJ18B7U540 433 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 CLGNO14967 610 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 KRT14P02533 472 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 SCP2P22307 547 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 PTPREP23469 700 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 SEC24CP53992 1094 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 GUCY1A3Q02108 690 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 KCNJ12Q14500 433 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 HLTFQ14527 1009 aaKnown RBP eCLIP7.48□□□□□ -1.21
LMO3-235ENST00000616247 KCTD19Q17RG1 926 aaPredicted RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 RILPL1Q5EBL4 403 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 CFAP58Q5T655 872 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 IQCEQ6IPM2 695 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 NELFBQ8WX92 580 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 WASF1Q92558 559 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 CEP89Q96ST8 783 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 EHD2Q9NZN4 543 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 E7EVH7 732 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 RANBP6O60518 1105 aaKnown RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 ARHGAP25P42331 645 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 PAFAH1B1P43034 410 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 NAA25Q14CX7 972 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 B4GALNT4Q76KP1 1039 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 RPAINQ86UA6 219 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 NKX2-3Q8TAU0 364 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 LRRC1Q9BTT6 524 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 CNNM1Q9NRU3 951 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 DMGDHQ9UI17 866 aaKnown RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 FBXO2Q9UK22 296 aaPredicted RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 MYO5BQ9ULV0 1848 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 UBN2Q6ZU65 1347 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 A2ML1A8K2U0 1454 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 AGLP35573 1532 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 A0A0G2JS52 829 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 TRIM49BA6NDI0 452 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 PITPNM1O00562 1244 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 CYLC1P35663 651 aaPredicted RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 TOB1P50616 345 aaPredicted RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 PAK1Q13153 545 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 PDIA6Q15084 440 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 CEP85LQ5SZL2 805 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 NBPF14Q5TI25 921 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 CCNI2Q6ZMN8 369 aaPredicted RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 KRT26Q7Z3Y9 468 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 SUGP1Q8IWZ8 645 aaKnown RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 HELBQ8NG08 1087 aaPredicted RBP7.48□□□□□ -1.21
LMO3-235ENST00000616247 PAGE5Q96GU1 130 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 HAUS4Q9H6D7 363 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 TBC1D2BQ9UPU7 963 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 GDAQ9Y2T3 454 aa7.48□□□□□ -1.21
LMO3-235ENST00000616247 EIF3HO15372 352 aaKnown RBP eCLIP7.47□□□□□ -1.21
LMO3-235ENST00000616247 AKR1B10O60218 316 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 PRPF6O94906 941 aaKnown RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 MCM7P33993 719 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 MTIF2P46199 727 aaKnown RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 KRT83P78385 493 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 APBA1Q02410 837 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 NNTQ13423 1086 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 WTAPQ15007 396 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 PTPROQ16827 1216 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 WDR93Q6P2C0 686 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 TTLL7Q6ZT98 887 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 MICALCLQ6ZW33 695 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 TRIML1Q8N9V2 468 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 CCDC51Q96ER9 411 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 CCDC42Q96M95 316 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 CWC25Q9NXE8 425 aaPredicted RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 ODF2LQ9ULJ1 636 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 PHF8Q9UPP1 1060 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 PDE2AO00408 941 aaPredicted RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 SH2B2O14492 632 aaPredicted RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 ZFYP08048 801 aaPredicted RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 SNRPA1P09661 255 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms