RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TTC19Q6DKK2 380 aaPredicted RBP14.42□□□□□ -0.1
USP6NL-205ENST00000609104 SCYL1Q96KG9 808 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 ADCY7P51828 1080 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 TPX2Q9ULW0 747 aaKnown RBP14.42□□□□□ -0.1
USP6NL-205ENST00000609104 COG7P83436 770 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 GCKP35557 465 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 TPH2Q8IWU9 490 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 P3H4Q92791 437 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 DKC1O60832 514 aaKnown RBP eCLIP14.42□□□□□ -0.1
USP6NL-205ENST00000609104 PHBP35232 272 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 VPS41P49754 854 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 U2AF1L4Q8WU68 220 aaKnown RBP14.42□□□□□ -0.1
USP6NL-205ENST00000609104 TSPYL2Q9H2G4 693 aaPredicted RBP14.42□□□□□ -0.1
USP6NL-205ENST00000609104 WHAMMP3Q1A5X7 153 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 LMBRD1Q9NUN5 540 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 KLHL14Q9P2G3 628 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 RNMTO43148 476 aaKnown RBP14.42□□□□□ -0.1
USP6NL-205ENST00000609104 GNA14O95837 355 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 CLTAP09496 248 aa14.42□□□□□ -0.1
USP6NL-205ENST00000609104 KAZNQ674X7 775 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 HINFPQ9BQA5 517 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 SERTAD1Q9UHV2 236 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 UFL1O94874 794 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 CPXCR1Q8N123 301 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 DESI2Q9BSY9 194 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 GOLGA8KD6RF30 607 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 SMIM24O75264 130 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 SETSIPP0DME0 302 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 TCP10Q12799 353 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 DBNDD2Q9BQY9 259 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 ANKFY1Q9P2R3 1169 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 USH1CQ9Y6N9 552 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 SCYL2Q6P3W7 929 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 TSC1Q92574 1164 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 NUCKS1Q9H1E3 243 aaKnown RBP14.41□□□□□ -0.1
USP6NL-205ENST00000609104 WDR46O15213 610 aaKnown RBP14.41□□□□□ -0.1
USP6NL-205ENST00000609104 IFNB1P01574 187 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 TAF5LO75529 589 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 ADCY8P40145 1251 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 CYP2J2P51589 502 aa14.41□□□□□ -0.1
USP6NL-205ENST00000609104 CCDC84Q86UT8 332 aaPredicted RBP14.4□□□□□ -0.1
USP6NL-205ENST00000609104 CMTR1Q8N1G2 835 aaKnown RBP14.4□□□□□ -0.1
USP6NL-205ENST00000609104 MX2P20592 715 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 SAT1P21673 171 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 BRD3Q15059 726 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 FRMD3A2A2Y4 597 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 TRIM58Q8NG06 486 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 RPSAP08865 295 aaKnown RBP14.4□□□□□ -0.1
USP6NL-205ENST00000609104 SLC1A4P43007 532 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 MORC3Q14149 939 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 PDZD8Q8NEN9 1154 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 SEPT10Q9P0V9 454 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 KDM5BQ9UGL1 1544 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 KCNJ18B7U540 433 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 CFBP00751 764 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 STAT1P42224 750 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 KCNJ12Q14500 433 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 SPECC1L-ADORA2AF8WAN1 911 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 HIP1RO75146 1068 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 BIRC2Q13490 618 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.17e-8■■■■■ 27.1
USP6NL-205ENST00000609104 CAPS2Q9BXY5 557 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 GLT8D2Q9H1C3 349 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 VCX3AQ9NNX9 186 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 ST7Q9NRC1 585 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 FANCAO15360 1455 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 MAP3K21Q5TCX8 1036 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 SERPINB6P35237 376 aa14.4□□□□□ -0.1
USP6NL-205ENST00000609104 UHMK1Q8TAS1 419 aaKnown RBP14.4□□□□□ -0.1
USP6NL-205ENST00000609104 THAP12O43422 761 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 TECP42680 631 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 KIAA0586Q9BVV6 1533 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 PPFIA2O75334 1257 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 MED10Q9BTT4 135 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 THOC2Q8NI27 1593 aaKnown RBP14.39□□□□□ -0.11
USP6NL-205ENST00000609104 KRT25Q7Z3Z0 450 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 DPH5Q9H2P9 285 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 GSTA1P08263 222 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 GSTA2P09210 222 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 PEX19P40855 299 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 METTL22Q9BUU2 404 aaPredicted RBP14.39□□□□□ -0.11
USP6NL-205ENST00000609104 LRRC8AQ8IWT6 810 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 CXorf38Q8TB03 319 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 XRCC5P13010 732 aaKnown RBP14.39□□□□□ -0.11
USP6NL-205ENST00000609104 ATF7P17544 494 aaPredicted RBP14.39□□□□□ -0.11
USP6NL-205ENST00000609104 MRPL46Q9H2W6 279 aaKnown RBP14.39□□□□□ -0.11
USP6NL-205ENST00000609104 AZI2Q9H6S1 392 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 TMEM63CQ9P1W3 806 aa14.39□□□□□ -0.11
USP6NL-205ENST00000609104 EYA2O00167 538 aa14.38□□□□□ -0.11
USP6NL-205ENST00000609104 STMN1P16949 149 aa14.38□□□□□ -0.11
USP6NL-205ENST00000609104 RBBP5Q15291 538 aaKnown RBP14.38□□□□□ -0.11
USP6NL-205ENST00000609104 KRT40Q6A162 431 aa14.38□□□□□ -0.11
USP6NL-205ENST00000609104 SGSM2O43147 1006 aa14.38□□□□□ -0.11
USP6NL-205ENST00000609104 PPFIA4O75335 1185 aa14.38□□□□□ -0.11
USP6NL-205ENST00000609104 KRT3P12035 628 aa14.38□□□□□ -0.11
USP6NL-205ENST00000609104 DBN1Q16643 649 aa14.38□□□□□ -0.11
USP6NL-205ENST00000609104 FAM71BQ8TC56 605 aa14.38□□□□□ -0.11
USP6NL-205ENST00000609104 PPME1Q9Y570 386 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms