RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 OXER1Q8TDS5 423 aa25.27■■□□□ 1.64
SHANK2-220ENST00000608988 SYMPKQ92797 1274 aaKnown RBP25.27■■□□□ 1.64
SHANK2-220ENST00000608988 BRMS1Q9HCU9 246 aa25.27■■□□□ 1.64
SHANK2-220ENST00000608988 RMND1Q9NWS8 449 aa25.27■■□□□ 1.64
SHANK2-220ENST00000608988 FAN1Q9Y2M0 1017 aa25.27■■□□□ 1.64
SHANK2-220ENST00000608988 TACC3Q9Y6A5 838 aa25.27■■□□□ 1.64
SHANK2-220ENST00000608988 A0A087X0B3 334 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 PSMD14O00487 310 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 N4BP3O15049 544 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 AFMP43652 599 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 COPB1P53618 953 aaKnown RBP25.26■■□□□ 1.63
SHANK2-220ENST00000608988 STX17P56962 302 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 ERVK-24P63145 666 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 TARSL2A2RTX5 802 aaKnown RBP25.26■■□□□ 1.63
SHANK2-220ENST00000608988 PRPF3O43395 683 aaKnown RBP25.26■■□□□ 1.63
SHANK2-220ENST00000608988 RHOXF2BP0C7M4 288 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 NLRP10Q86W26 655 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 MAGEB6Q8N7X4 407 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 ACRBPQ8NEB7 543 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 CDC5LQ99459 802 aaKnown RBP25.26■■□□□ 1.63
SHANK2-220ENST00000608988 RHOXF2Q9BQY4 288 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 HAUS4Q9H6D7 363 aa25.26■■□□□ 1.63
SHANK2-220ENST00000608988 MYH6P13533 1939 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 SLC5A1P13866 664 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 TDO2P48775 406 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 SEMA3FQ13275 785 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 EHBP1Q8NDI1 1231 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 EPSTI1Q96J88 318 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 UBAC1Q9BSL1 405 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 INCENPQ9NQS7 918 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 RBM28Q9NW13 759 aaKnown RBP25.25■■□□□ 1.63
SHANK2-220ENST00000608988 CTNND2Q9UQB3 1225 aa25.25■■□□□ 1.63
SHANK2-220ENST00000608988 GTPBP6O43824 516 aaPredicted RBP25.24■■□□□ 1.63
SHANK2-220ENST00000608988 TRAPPC11Q7Z392 1133 aa25.24■■□□□ 1.63
SHANK2-220ENST00000608988 IPO4Q8TEX9 1081 aaKnown RBP25.24■■□□□ 1.63
SHANK2-220ENST00000608988 NUP88Q99567 741 aaPredicted RBP25.24■■□□□ 1.63
SHANK2-220ENST00000608988 PLCH1Q4KWH8 1693 aa25.24■■□□□ 1.63
SHANK2-220ENST00000608988 A0A0U1RQJ8 604 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 PDE8AO60658 829 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 ATF3P18847 181 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 USP14P54578 494 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 CKAP4Q07065 602 aaKnown RBP25.23■■□□□ 1.63
SHANK2-220ENST00000608988 PAK1Q13153 545 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 ATRIPQ8WXE1 791 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 CCDC102AQ96A19 550 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 ARMT1Q9H993 441 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 ANAPC4Q9UJX5 808 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 TNNT3P45378 269 aaPredicted RBP25.23■■□□□ 1.63
SHANK2-220ENST00000608988 TRAPPC10P48553 1259 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 TCP11X2Q5H9J9 407 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 SHANK3Q9BYB0 1731 aa25.23■■□□□ 1.63
SHANK2-220ENST00000608988 STARD3NLO95772 234 aa25.22■■□□□ 1.63
SHANK2-220ENST00000608988 ATP2B1P20020 1258 aa25.22■■□□□ 1.63
SHANK2-220ENST00000608988 ATP2C1P98194 919 aaPredicted RBP25.22■■□□□ 1.63
SHANK2-220ENST00000608988 E2F4Q16254 413 aa25.22■■□□□ 1.63
SHANK2-220ENST00000608988 RRP12Q5JTH9 1297 aaKnown RBP25.22■■□□□ 1.63
SHANK2-220ENST00000608988 EPN1Q9Y6I3 576 aaPredicted RBP25.22■■□□□ 1.63
SHANK2-220ENST00000608988 SPATA31A3Q5VYP0 1347 aa25.22■■□□□ 1.63
SHANK2-220ENST00000608988 A0A1W2PQC6 194 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 IRS4O14654 1257 aaPredicted RBP25.21■■□□□ 1.63
SHANK2-220ENST00000608988 CALM1P0DP23 149 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 CALM2P0DP24 149 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 CALM3P0DP25 149 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 MAGEA9P43362 315 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 SEC23AQ15436 765 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 ZNF658Q5TYW1 1059 aaPredicted RBP25.21■■□□□ 1.63
SHANK2-220ENST00000608988 C10orf67Q8IYJ2 551 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 ESR2Q92731 530 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 LCMT1Q9UIC8 334 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 SLC4A4Q9Y6R1 1079 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 KCNJ18B7U540 433 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 H7C1D1 291 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 NDUFA10O95299 355 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 KRT9P35527 623 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 KCNJ12Q14500 433 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 PKN1Q16512 942 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 RRAGBQ5VZM2 374 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 NUP133Q8WUM0 1156 aa25.21■■□□□ 1.63
SHANK2-220ENST00000608988 N4BP1O75113 896 aaKnown RBP25.2■■□□□ 1.62
SHANK2-220ENST00000608988 CCT6AP40227 531 aaKnown RBP25.2■■□□□ 1.62
SHANK2-220ENST00000608988 TTC38Q5R3I4 469 aa25.2■■□□□ 1.62
SHANK2-220ENST00000608988 PAPD7Q5XG87 772 aaKnown RBP25.2■■□□□ 1.62
SHANK2-220ENST00000608988 NOA1Q8NC60 698 aaKnown RBP25.2■■□□□ 1.62
SHANK2-220ENST00000608988 OR8K1Q8NGG5 319 aa25.2■■□□□ 1.62
SHANK2-220ENST00000608988 TNFRSF25Q93038 417 aa25.2■■□□□ 1.62
SHANK2-220ENST00000608988 TOMM22Q9NS69 142 aa25.2■■□□□ 1.62
SHANK2-220ENST00000608988 RSPH14Q9UHP6 348 aa25.2■■□□□ 1.62
SHANK2-220ENST00000608988 XDHP47989 1333 aa25.2■■□□□ 1.62
SHANK2-220ENST00000608988 STRCQ7RTU9 1775 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 FUT2Q10981 343 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 CABLES1Q8TDN4 633 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 RUBCNQ92622 972 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 DNAJC7Q99615 494 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 LRRIQ3A6PVS8 624 aaPredicted RBP25.19■■□□□ 1.62
SHANK2-220ENST00000608988 IL2RBP14784 551 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 KRT83P78385 493 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 PPARAQ07869 468 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 PDXDC2PQ6P474 469 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 AFAP1L1Q8TED9 768 aa25.19■■□□□ 1.62
SHANK2-220ENST00000608988 SLF1Q9BQI6 1058 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms