RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 PRAMEF18Q5VWM3 479 aa18.78■□□□□ 0.6
CNN2-212ENST00000607102 FAM184AQ8NB25 1140 aa18.78■□□□□ 0.6
CNN2-212ENST00000607102 SPRYD3Q8NCJ5 442 aa18.78■□□□□ 0.6
CNN2-212ENST00000607102 GMCL1P1Q8NEA9 526 aa18.78■□□□□ 0.6
CNN2-212ENST00000607102 DCAF4Q8WV16 495 aa18.78■□□□□ 0.6
CNN2-212ENST00000607102 MYL10Q9BUA6 226 aa18.78■□□□□ 0.6
CNN2-212ENST00000607102 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
CNN2-212ENST00000607102 NMRK2Q9NPI5 230 aa18.78■□□□□ 0.6
CNN2-212ENST00000607102 SSC5DA1L4H1 1573 aa18.77■□□□□ 0.6
CNN2-212ENST00000607102 SLURP2P0DP57 97 aa18.77■□□□□ 0.6
CNN2-212ENST00000607102 GUCY1A2P33402 732 aa18.77■□□□□ 0.6
CNN2-212ENST00000607102 FKBP1BP68106 108 aa18.77■□□□□ 0.6
CNN2-212ENST00000607102 MAP3K9P80192 1104 aa18.77■□□□□ 0.6
CNN2-212ENST00000607102 GPATCH4Q5T3I0 446 aaKnown RBP18.77■□□□□ 0.6
CNN2-212ENST00000607102 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.77■□□□□ 0.6
CNN2-212ENST00000607102 WASF1Q92558 559 aa18.77■□□□□ 0.6
CNN2-212ENST00000607102 FEZ1Q99689 392 aa18.77■□□□□ 0.6
CNN2-212ENST00000607102 NCOA5Q9HCD5 579 aaKnown RBP18.77■□□□□ 0.6
CNN2-212ENST00000607102 IFNAR1P17181 557 aa18.76■□□□□ 0.59
CNN2-212ENST00000607102 RXRAP19793 462 aa18.76■□□□□ 0.59
CNN2-212ENST00000607102 RRP1BQ14684 758 aaKnown RBP18.76■□□□□ 0.59
CNN2-212ENST00000607102 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
CNN2-212ENST00000607102 CHADLQ6NUI6 762 aa18.76■□□□□ 0.59
CNN2-212ENST00000607102 CCDC144CPQ8IYA2 1237 aa18.76■□□□□ 0.59
CNN2-212ENST00000607102 ANKRD13AQ8IZ07 590 aa18.76■□□□□ 0.59
CNN2-212ENST00000607102 LRRC47Q8N1G4 583 aaKnown RBP18.76■□□□□ 0.59
CNN2-212ENST00000607102 NSUN7Q8NE18 718 aaKnown RBP18.76■□□□□ 0.59
CNN2-212ENST00000607102 FOXD4L1Q9NU39 408 aa18.76■□□□□ 0.59
CNN2-212ENST00000607102 STK36Q9NRP7 1315 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 PTPDC1A2A3K4 754 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 USP2O75604 605 aaPredicted RBP18.75■□□□□ 0.59
CNN2-212ENST00000607102 SMARCA1P28370 1054 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 GJB2P29033 226 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 INPP5BP32019 993 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 USP14P54578 494 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 SSRP1Q08945 709 aaKnown RBP18.75■□□□□ 0.59
CNN2-212ENST00000607102 MAP3K11Q16584 847 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 RAB11FIP4Q86YS3 637 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 SMARCC2Q8TAQ2 1214 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 TMX2Q9Y320 296 aa18.75■□□□□ 0.59
CNN2-212ENST00000607102 PDHBP11177 359 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 ADD1P35611 737 aaKnown RBP18.74■□□□□ 0.59
CNN2-212ENST00000607102 NUCB2P80303 420 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 ST3GAL1Q11201 340 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 SLFN13Q68D06 897 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 TMTC3Q6ZXV5 915 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 CLEC10AQ8IUN9 316 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 LPAR1Q92633 364 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 WDR18Q9BV38 432 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 RNF26Q9BY78 433 aaPredicted RBP18.74■□□□□ 0.59
CNN2-212ENST00000607102 CHMP5Q9NZZ3 219 aa18.74■□□□□ 0.59
CNN2-212ENST00000607102 PAPPA2Q9BXP8 1791 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 RAD21O60216 631 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 SNHG28P0DPA3 235 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 CDC27P30260 824 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 SLC1A4P43007 532 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 PRKG1Q13976 671 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 RGS22Q8NE09 1264 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 KIAA1683Q9H0B3 1180 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 VCPKMTQ9H867 229 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 ORC3Q9UBD5 711 aaPredicted RBP18.73■□□□□ 0.59
CNN2-212ENST00000607102 MTMR7Q9Y216 660 aa18.73■□□□□ 0.59
CNN2-212ENST00000607102 PALM3A6NDB9 673 aaPredicted RBP18.72■□□□□ 0.59
CNN2-212ENST00000607102 USP17L10C9JJH3 530 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 F5H6K3 240 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 DEXIO95424 95 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 FMNL1O95466 1100 aaPredicted RBP18.72■□□□□ 0.59
CNN2-212ENST00000607102 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 XBP1P17861 261 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 PTPRAP18433 802 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 JAG1P78504 1218 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 KLRC3Q07444 240 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 ZNF543Q08ER8 600 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 C2orf69Q8N8R5 385 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 ZNF280CQ8ND82 737 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 RBM46Q8TBY0 533 aaKnown RBP18.72■□□□□ 0.59
CNN2-212ENST00000607102 ZKSCAN4Q969J2 545 aaPredicted RBP18.72■□□□□ 0.59
CNN2-212ENST00000607102 FAM217BQ9NTX9 383 aaPredicted RBP18.72■□□□□ 0.59
CNN2-212ENST00000607102 MAD2L2Q9UI95 211 aa18.72■□□□□ 0.59
CNN2-212ENST00000607102 ISY1Q9ULR0 285 aaKnown RBP18.72■□□□□ 0.59
CNN2-212ENST00000607102 C19orf81C9J6K1 198 aa18.71■□□□□ 0.59
CNN2-212ENST00000607102 KLRF2D3W0D1 207 aa18.71■□□□□ 0.59
CNN2-212ENST00000607102 TRIM29Q14134 588 aa18.71■□□□□ 0.59
CNN2-212ENST00000607102 VGLL4Q14135 290 aa18.71■□□□□ 0.59
CNN2-212ENST00000607102 NTRK3Q16288 839 aa18.71■□□□□ 0.59
CNN2-212ENST00000607102 SHROOM1Q2M3G4 852 aaPredicted RBP18.71■□□□□ 0.59
CNN2-212ENST00000607102 SPZ1Q9BXG8 430 aa18.71■□□□□ 0.59
CNN2-212ENST00000607102 SLC26A6Q9BXS9 759 aa18.71■□□□□ 0.59
CNN2-212ENST00000607102 JAK2O60674 1132 aa18.7■□□□□ 0.58
CNN2-212ENST00000607102 CTDNEP1O95476 244 aa18.7■□□□□ 0.58
CNN2-212ENST00000607102 NDUFB10O96000 172 aa18.7■□□□□ 0.58
CNN2-212ENST00000607102 BMP3P12645 472 aa18.7■□□□□ 0.58
CNN2-212ENST00000607102 LARP1BQ659C4 914 aaKnown RBP18.7■□□□□ 0.58
CNN2-212ENST00000607102 USP17L2Q6R6M4 530 aa18.7■□□□□ 0.58
CNN2-212ENST00000607102 ERO1BQ86YB8 467 aa18.7■□□□□ 0.58
CNN2-212ENST00000607102 SIAH1Q8IUQ4 282 aa18.7■□□□□ 0.58
CNN2-212ENST00000607102 DDX11Q96FC9 970 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms