RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CEACAM5P06731 702 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 ETV3P41162 512 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 CEP170Q5SW79 1584 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 FBXW10Q5XX13 1052 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 NLRC3Q7RTR2 1065 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 RBBP8NLQ8NC74 664 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 COX4I2Q96KJ9 171 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 CAPN10Q9HC96 672 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 ZFP64Q9NPA5 681 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 BSDC1Q9NW68 430 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 CBX7O95931 251 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 PRNPP04156 253 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 ZNF865P0CJ78 1059 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 NME1P15531 152 aaKnown RBP5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 ATF4P18848 351 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 ITIH2P19823 946 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 GBP1P32455 592 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 NASPP49321 788 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 GNL2Q13823 731 aaKnown RBP5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 IFI16Q16666 785 aaKnown RBP5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 NKPD1Q17RQ9 610 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 INTS3Q68E01 1043 aaKnown RBP5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 C22orf34Q6ZV56 151 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 VPS37DQ86XT2 251 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 TNKS2Q9H2K2 1166 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 CUL7Q14999 1698 aa5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 COL17A1Q9UMD9 1497 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP3-201ENST00000600888 TMEM265A0A087WTH1 108 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 TNFRSF10CO14798 259 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 ADAMTS4O75173 837 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 UBOX5O94941 541 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 POLR2BP30876 1174 aaKnown RBP5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 KIR3DL1P43629 444 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 CCDC81Q6ZN84 652 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 SPACA3Q8IXA5 215 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 Q8N3U1 123 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 MFSD4AQ8N468 514 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 CRBNQ96SW2 442 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 TINF2Q9BSI4 451 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 CCDC39Q9UFE4 941 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 VAV3Q9UKW4 847 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 SNX11Q9Y5W9 270 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 CAPN6Q9Y6Q1 641 aa5.76□□□□□ -1.49
CKS1BP3-201ENST00000600888 KIF27Q86VH2 1401 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 FAM155AB1AL88 458 aaPredicted RBP5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 WNT11O96014 354 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 CCNFP41002 786 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 GIPRP48546 466 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 EIF6P56537 245 aaKnown RBP5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 PRKCQQ04759 706 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 CYB5RLQ6IPT4 315 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 RNF141Q8WVD5 230 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 VWCEQ96DN2 955 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 MISP3Q96FF7 219 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 Q96M66 194 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 KREMEN1Q96MU8 473 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 SLC9A7Q96T83 725 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 TM9SF2Q99805 663 aa5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 SRRTQ9BXP5 876 aaKnown RBP5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.75□□□□□ -1.49
CKS1BP3-201ENST00000600888 RUSC2Q8N2Y8 1516 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 LRRN2O75325 713 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 ACRP10323 421 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 CHMP4BP1P59074 171 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 TNK2Q07912 1038 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 BNIP3Q12983 259 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 AOC3Q16853 763 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 RUFY4Q6ZNE9 571 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 LSRQ86X29 649 aaPredicted RBP5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 STK11IPQ8N1F8 1099 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 TAB3Q8N5C8 712 aaPredicted RBP5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 SLC43A3Q8NBI5 491 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 BCL7CQ8WUZ0 217 aaPredicted RBP5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 CPLX3Q8WVH0 158 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 HRASLS5Q96KN8 279 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 FBXL18Q96ME1 805 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 SLC5A6Q9Y289 635 aa5.74□□□□□ -1.49
CKS1BP3-201ENST00000600888 GUCY2CP25092 1073 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 CLCN7P51798 805 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 CDKAL1Q5VV42 579 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 NFXL1Q6ZNB6 911 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 SPRED2Q7Z698 418 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 NPM2Q86SE8 214 aaKnown RBP5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 VSIG10LQ86VR7 867 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 TMEM192Q8IY95 271 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 PIWIL2Q8TC59 973 aaKnown RBP5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 SHDQ96IW2 340 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 HSPA12BQ96MM6 686 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 ASPNQ9BXN1 380 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 KCNH3Q9ULD8 1083 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 STRIP2Q9ULQ0 834 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 ANGEL1Q9UNK9 670 aaKnown RBP5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 ST14Q9Y5Y6 855 aa5.73□□□□□ -1.49
CKS1BP3-201ENST00000600888 ERCC6L2Q5T890 1561 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 CLEC3AO75596 197 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 ZC3H6P61129 1189 aaKnown RBP5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 ARID5AQ03989 594 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 NBPF12Q5TAG4 269 aaPredicted RBP5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 UNC5AQ6ZN44 842 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 DTWD2Q8NBA8 298 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms