RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 MAP2K5Q13163 448 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 C12orf60Q5U649 245 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 WDR78Q5VTH9 848 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 NECAB2Q7Z6G3 386 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 SIAH1Q8IUQ4 282 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 DCTPP1Q9H773 170 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 CWC22Q9HCG8 908 aaKnown RBP18.25■□□□□ 0.51
TGFB1-202ENST00000597453 ECHDC1Q9NTX5 307 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 RBM27Q9P2N5 1060 aaKnown RBP18.25■□□□□ 0.51
TGFB1-202ENST00000597453 CCND3P30281 292 aaPredicted RBP18.24■□□□□ 0.51
TGFB1-202ENST00000597453 CDK8P49336 464 aa18.24■□□□□ 0.51
TGFB1-202ENST00000597453 TSHZ3Q63HK5 1081 aa18.24■□□□□ 0.51
TGFB1-202ENST00000597453 TRMT44Q8IYL2 757 aaKnown RBP18.24■□□□□ 0.51
TGFB1-202ENST00000597453 CRBNQ96SW2 442 aa18.24■□□□□ 0.51
TGFB1-202ENST00000597453 PRO3102Q9H379 93 aa18.24■□□□□ 0.51
TGFB1-202ENST00000597453 OGDHLQ9ULD0 1010 aa18.24■□□□□ 0.51
TGFB1-202ENST00000597453 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
TGFB1-202ENST00000597453 PTPREP23469 700 aa18.23■□□□□ 0.51
TGFB1-202ENST00000597453 COG2Q14746 738 aa18.23■□□□□ 0.51
TGFB1-202ENST00000597453 ZSCAN25Q6NSZ9 544 aa18.23■□□□□ 0.51
TGFB1-202ENST00000597453 C16orf86Q6ZW13 317 aa18.23■□□□□ 0.51
TGFB1-202ENST00000597453 TANGO6Q9C0B7 1094 aa18.23■□□□□ 0.51
TGFB1-202ENST00000597453 FLRT1Q9NZU1 646 aa18.23■□□□□ 0.51
TGFB1-202ENST00000597453 GREB1LQ9C091 1923 aaPredicted RBP18.23■□□□□ 0.51
TGFB1-202ENST00000597453 ZNF236Q9UL36 1845 aa18.23■□□□□ 0.51
TGFB1-202ENST00000597453 COL11A1P12107 1806 aaPredicted RBP18.22■□□□□ 0.51
TGFB1-202ENST00000597453 SLC15A5A6NIM6 579 aa18.22■□□□□ 0.51
TGFB1-202ENST00000597453 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
TGFB1-202ENST00000597453 ICA1Q05084 483 aa18.22■□□□□ 0.51
TGFB1-202ENST00000597453 CTR9Q6PD62 1173 aa18.22■□□□□ 0.51
TGFB1-202ENST00000597453 SPICE1Q8N0Z3 855 aa18.22■□□□□ 0.51
TGFB1-202ENST00000597453 NBPF3Q9H094 633 aa18.22■□□□□ 0.51
TGFB1-202ENST00000597453 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
TGFB1-202ENST00000597453 GRB14Q14449 540 aa18.21■□□□□ 0.51
TGFB1-202ENST00000597453 LHX8Q68G74 356 aa18.21■□□□□ 0.51
TGFB1-202ENST00000597453 AMOTL1Q8IY63 956 aa18.21■□□□□ 0.51
TGFB1-202ENST00000597453 DDRGK1Q96HY6 314 aa18.21■□□□□ 0.51
TGFB1-202ENST00000597453 CCDC17Q96LX7 622 aa18.21■□□□□ 0.51
TGFB1-202ENST00000597453 STRBPQ96SI9 672 aaKnown RBP18.21■□□□□ 0.51
TGFB1-202ENST00000597453 MOV10L1Q9BXT6 1211 aaKnown RBP18.21■□□□□ 0.51
TGFB1-202ENST00000597453 C11orf49Q9H6J7 331 aa18.21■□□□□ 0.51
TGFB1-202ENST00000597453 ARHGEF10LQ9HCE6 1279 aa18.21■□□□□ 0.51
TGFB1-202ENST00000597453 LAMA3Q16787 3333 aa18.21■□□□□ 0.51
TGFB1-202ENST00000597453 DSG3P32926 999 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 C7orf61Q8IZ16 206 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 KBTBD3Q8NAB2 608 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 NPLOC4Q8TAT6 608 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 LPAR1Q92633 364 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 HOXC10Q9NYD6 342 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 SUPT16HQ9Y5B9 1047 aaKnown RBP18.2■□□□□ 0.5
TGFB1-202ENST00000597453 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 PFASO15067 1338 aa18.2■□□□□ 0.5
TGFB1-202ENST00000597453 FLOT1O75955 427 aa18.19■□□□□ 0.5
TGFB1-202ENST00000597453 HOXC6P09630 235 aa18.19■□□□□ 0.5
TGFB1-202ENST00000597453 AAMPQ13685 434 aa18.19■□□□□ 0.5
TGFB1-202ENST00000597453 OSBP2Q969R2 916 aa18.19■□□□□ 0.5
TGFB1-202ENST00000597453 ATG4CQ96DT6 458 aa18.19■□□□□ 0.5
TGFB1-202ENST00000597453 SPATC1LQ9H0A9 340 aa18.19■□□□□ 0.5
TGFB1-202ENST00000597453 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
TGFB1-202ENST00000597453 ARPP21Q9UBL0 812 aaPredicted RBP18.19■□□□□ 0.5
TGFB1-202ENST00000597453 IVNS1ABPQ9Y6Y0 642 aa18.19■□□□□ 0.5
TGFB1-202ENST00000597453 ZNFX1Q9P2E3 1918 aaKnown RBP18.18■□□□□ 0.5
TGFB1-202ENST00000597453 GSG1L2A8MUP6 293 aa18.18■□□□□ 0.5
TGFB1-202ENST00000597453 EEF2P13639 858 aaKnown RBP18.18■□□□□ 0.5
TGFB1-202ENST00000597453 ERCC3P19447 782 aa18.18■□□□□ 0.5
TGFB1-202ENST00000597453 ATP2B2Q01814 1243 aa18.18■□□□□ 0.5
TGFB1-202ENST00000597453 MFSD14CQ5VZR4 134 aa18.18■□□□□ 0.5
TGFB1-202ENST00000597453 APPBP2Q92624 585 aa18.18■□□□□ 0.5
TGFB1-202ENST00000597453 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
TGFB1-202ENST00000597453 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.18■□□□□ 0.5
TGFB1-202ENST00000597453 STAP2Q9UGK3 403 aa18.18■□□□□ 0.5
TGFB1-202ENST00000597453 WDR46O15213 610 aaKnown RBP18.17■□□□□ 0.5
TGFB1-202ENST00000597453 RNF113AO15541 343 aaKnown RBP18.17■□□□□ 0.5
TGFB1-202ENST00000597453 IGHA2P01877 340 aa18.17■□□□□ 0.5
TGFB1-202ENST00000597453 COL6A1P12109 1028 aa18.17■□□□□ 0.5
TGFB1-202ENST00000597453 ADORA2AP29274 412 aa18.17■□□□□ 0.5
TGFB1-202ENST00000597453 CYP2C19P33261 490 aa18.17■□□□□ 0.5
TGFB1-202ENST00000597453 SAMD1Q6SPF0 538 aaPredicted RBP18.17■□□□□ 0.5
TGFB1-202ENST00000597453 STK11IPQ8N1F8 1099 aa18.17■□□□□ 0.5
TGFB1-202ENST00000597453 SHCBP1Q8NEM2 672 aa18.17■□□□□ 0.5
TGFB1-202ENST00000597453 OTUD7AQ8TE49 926 aaPredicted RBP18.17■□□□□ 0.5
TGFB1-202ENST00000597453 EPB41L4AQ9HCS5 686 aaPredicted RBP18.17■□□□□ 0.5
TGFB1-202ENST00000597453 ZMYND8Q9ULU4 1186 aaPredicted RBP18.17■□□□□ 0.5
TGFB1-202ENST00000597453 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
TGFB1-202ENST00000597453 MYH4Q9Y623 1939 aa18.16■□□□□ 0.5
TGFB1-202ENST00000597453 M0R2C6 588 aa18.16■□□□□ 0.5
TGFB1-202ENST00000597453 PLS1Q14651 629 aa18.16■□□□□ 0.5
TGFB1-202ENST00000597453 SBK1Q52WX2 424 aa18.16■□□□□ 0.5
TGFB1-202ENST00000597453 MB21D1Q8N884 522 aa18.16■□□□□ 0.5
TGFB1-202ENST00000597453 TRPV1Q8NER1 839 aa18.16■□□□□ 0.5
TGFB1-202ENST00000597453 KANSL2Q9H9L4 492 aa18.16■□□□□ 0.5
TGFB1-202ENST00000597453 FBXO28Q9NVF7 368 aa18.16■□□□□ 0.5
TGFB1-202ENST00000597453 GPAA1O43292 621 aa18.15■□□□□ 0.5
TGFB1-202ENST00000597453 RASA1P20936 1047 aa18.15■□□□□ 0.5
TGFB1-202ENST00000597453 DPP9Q86TI2 863 aa18.15■□□□□ 0.5
TGFB1-202ENST00000597453 PI4K2BQ8TCG2 481 aa18.15■□□□□ 0.5
TGFB1-202ENST00000597453 DDX20Q9UHI6 824 aaKnown RBP18.15■□□□□ 0.5
TGFB1-202ENST00000597453 PLXNA1Q9UIW2 1896 aa18.14■□□□□ 0.49
TGFB1-202ENST00000597453 MINDY4BA8MYZ0 360 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms