RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LCORLQ8N3X6 602 aa12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 DCP1AQ9NPI6 582 aaPredicted RBP12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 DDX20Q9UHI6 824 aaKnown RBP12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.37
CHMP2A-202ENST00000596708 A0A1W2PRG0 241 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 MSCO60682 206 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 CYP2D6P10635 497 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 CYP2C19P33261 490 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 MDM2Q00987 491 aaPredicted RBP12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 PLS1Q14651 629 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 SAMD1Q6SPF0 538 aaPredicted RBP12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 TMEM179Q6ZVK1 233 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 SLC44A5Q8NCS7 719 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 DYNLL2Q96FJ2 89 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 BOLA2Q9H3K6 86 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 SWAP70Q9UH65 585 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 MYH4Q9Y623 1939 aa12.76□□□□□ -0.37
CHMP2A-202ENST00000596708 A0A0G2JMZ2 1700 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 TCRBV5S4A2TA0A5A2 114 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 STRNO43815 780 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 RAB11FIP3O75154 756 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 HOXC6P09630 235 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 ATN1P54259 1190 aaPredicted RBP12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 DEFB123Q8N688 67 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 LPAR1Q92633 364 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 MOV10L1Q9BXT6 1211 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 SPATC1LQ9H0A9 340 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 ARHGEF10LQ9HCE6 1279 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 PAG1Q9NWQ8 432 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 ZNF236Q9UL36 1845 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 DDX19BQ9UMR2 479 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
CHMP2A-202ENST00000596708 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 PRKAB2O43741 272 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 FLOT1O75955 427 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 ERCC3P19447 782 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 ADORA2AP29274 412 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 DSG3P32926 999 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 SLFNL1Q499Z3 407 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 Q7L0L9 218 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 SPICE1Q8N0Z3 855 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 LBHD1Q9BQE6 289 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■□□□□ 8.5
CHMP2A-202ENST00000596708 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 PRKAG2Q9UGJ0 569 aa12.74□□□□□ -0.37
CHMP2A-202ENST00000596708 DLL1O00548 723 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 MBD4O95243 580 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 AKR1B1P15121 316 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 ADD2P35612 726 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 ICA1Q05084 483 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 KIAA1755Q5JYT7 1200 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 GJC2Q5T442 439 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 ANO1Q5XXA6 986 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 CLEC10AQ8IUN9 316 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 MB21D1Q8N884 522 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 ARRDC4Q8NCT1 418 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 SHCBP1Q8NEM2 672 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 TRPV1Q8NER1 839 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 SH2D4AQ9H788 454 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 TMX2Q9Y320 296 aa12.73□□□□□ -0.37
CHMP2A-202ENST00000596708 MCM3APO60318 1980 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 LTBP2Q14767 1821 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 CYP2D7A0A087X1C5 515 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 USP17L12C9JPN9 530 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 KBTBD13C9JR72 458 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 USP17L21D6R901 530 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 DNM1LO00429 736 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 RAD21O60216 631 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 COBLO75128 1261 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 CYBAP13498 195 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 ATP5JP18859 108 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 CDK8P49336 464 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 OLFML2BQ68BL8 750 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 SIRT2Q8IXJ6 389 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 ATG4CQ96DT6 458 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 CCDC17Q96LX7 622 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 MROH8Q9H579 483 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 VCPKMTQ9H867 229 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
CHMP2A-202ENST00000596708 RTP1P59025 263 aa12.71□□□□□ -0.37
CHMP2A-202ENST00000596708 PRAMEF19Q5SWL8 479 aa12.71□□□□□ -0.37
CHMP2A-202ENST00000596708 C12orf60Q5U649 245 aa12.71□□□□□ -0.37
CHMP2A-202ENST00000596708 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.37
CHMP2A-202ENST00000596708 HAUS7Q99871 368 aa12.71□□□□□ -0.37
CHMP2A-202ENST00000596708 ATP11BQ9Y2G3 1177 aa12.71□□□□□ -0.37
CHMP2A-202ENST00000596708 SLC4A4Q9Y6R1 1079 aa12.71□□□□□ -0.37
CHMP2A-202ENST00000596708 LAMA3Q16787 3333 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 SMIM22K7EJ46 135 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 WDR46O15213 610 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms