RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 DYNLL1P63167 89 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-208ENST00000595726 MRPS5P82675 430 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-208ENST00000595726 ADGRE1Q14246 886 aa16.88■□□□□ 0.29
SHKBP1-208ENST00000595726 LBX2Q6XYB7 198 aa16.88■□□□□ 0.29
SHKBP1-208ENST00000595726 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
SHKBP1-208ENST00000595726 GAS2L1Q99501 681 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-208ENST00000595726 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
SHKBP1-208ENST00000595726 PHF24Q9UPV7 400 aa16.88■□□□□ 0.29
SHKBP1-208ENST00000595726 PGK1P00558 417 aa16.87■□□□□ 0.29
SHKBP1-208ENST00000595726 MEIS3Q99687 375 aa16.87■□□□□ 0.29
SHKBP1-208ENST00000595726 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.87■□□□□ 0.29
SHKBP1-208ENST00000595726 STRNO43815 780 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 HLA-DOAP06340 250 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 PLCG2P16885 1265 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 ERCC3P19447 782 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 FAAP100Q0VG06 881 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 TATDN1Q6P1N9 297 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 C16orf59Q7L2K0 433 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 PBX4Q9BYU1 374 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 XPNPEP3Q9NQH7 507 aa16.86■□□□□ 0.29
SHKBP1-208ENST00000595726 MYO9BQ13459 2157 aa16.85■□□□□ 0.29
SHKBP1-208ENST00000595726 SRGAP3O43295 1099 aa16.85■□□□□ 0.29
SHKBP1-208ENST00000595726 IGFBP4P22692 258 aa16.85■□□□□ 0.29
SHKBP1-208ENST00000595726 USP14P54578 494 aa16.85■□□□□ 0.29
SHKBP1-208ENST00000595726 AKNAD1Q5T1N1 836 aa16.85■□□□□ 0.29
SHKBP1-208ENST00000595726 CCDC129Q6ZRS4 1044 aa16.85■□□□□ 0.29
SHKBP1-208ENST00000595726 SPATC1LQ9H0A9 340 aa16.85■□□□□ 0.29
SHKBP1-208ENST00000595726 A0A1W2PQ45 241 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 A0A1W2PQY0 241 aa16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 TAL1P17542 331 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 ABCB5Q2M3G0 1257 aa16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 SLC44A5Q8NCS7 719 aa16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 LENG1Q96BZ8 264 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 MAML3Q96JK9 1138 aa16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 SMC4Q9NTJ3 1288 aa16.84■□□□□ 0.29
SHKBP1-208ENST00000595726 SMCHD1A6NHR9 2005 aa16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 CYP2E1P05181 493 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 UQCRFS1P1P0C7P4 283 aa16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 RARBP10826 455 aa16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 PLS1Q14651 629 aa16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 COG2Q14746 738 aa16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 CERKLQ49MI3 558 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 NOB1Q9ULX3 412 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 TRANK1O15050 2925 aa16.83■□□□□ 0.28
SHKBP1-208ENST00000595726 A0A1W2PRG0 241 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 TIMP1P01033 207 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 KIAA1755Q5JYT7 1200 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 TMEM240Q5SV17 173 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 RNF180Q86T96 592 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 NCAPG2Q86XI2 1143 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 MIGA1Q8NAN2 632 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 IL27Q8NEV9 243 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 HOXC10Q9NYD6 342 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 SERPINB13Q9UIV8 391 aa16.82■□□□□ 0.28
SHKBP1-208ENST00000595726 ACRP10323 421 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 BMP1P13497 986 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 CYP7A1P22680 504 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 TFF2Q03403 129 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 SEPT2Q15019 361 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 ANKRD33Q7Z3H0 272 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 SHCBP1Q8NEM2 672 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 TANGO6Q9C0B7 1094 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 PIH1D3Q9NQM4 214 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 SLC5A4Q9NY91 659 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 HDAC5Q9UQL6 1122 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 CDK5RAP2Q96SN8 1893 aa16.81■□□□□ 0.28
SHKBP1-208ENST00000595726 DCDC2CA8MYV0 355 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 PGK2P07205 417 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 CSF2RAP15509 400 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 SHMT1P34896 483 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 USP5P45974 858 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 PLCD1P51178 756 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 ALDH1L2Q3SY69 923 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 CABP5Q9NP86 173 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 TCF20Q9UGU0 1960 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 PLXNA1Q9UIW2 1896 aa16.8■□□□□ 0.28
SHKBP1-208ENST00000595726 CT47B1P0C2W7 299 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 FCER1AP12319 257 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 ZAP70P43403 619 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 ACLYP53396 1101 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 EVX2Q03828 476 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 TTC39AQ5SRH9 613 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 RASIP1Q5U651 963 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 MFSD5Q6N075 450 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 ZNF365Q70YC5 407 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 ATG4CQ96DT6 458 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 TOX2Q96NM4 488 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 DBNDD2Q9BQY9 259 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 C1QTNF1Q9BXJ1 281 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 NKX2-4Q9H2Z4 354 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 MROH8Q9H579 483 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 EPHX3Q9H6B9 360 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 STARD7Q9NQZ5 370 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 TBX21Q9UL17 535 aa16.79■□□□□ 0.28
SHKBP1-208ENST00000595726 ZNF236Q9UL36 1845 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms