RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 NLRP5P59047 1200 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 GABPAQ06546 454 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 DOK7Q18PE1 504 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 ANO6Q4KMQ2 910 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 DAGLBQ8NCG7 672 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 C7orf43Q8WVR3 580 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 BPIFA3Q9BQP9 254 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 KIAA1468Q9P260 1216 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 SAP30BPQ9UHR5 308 aaKnown RBP11.92□□□□□ -0.5
VPS25-203ENST00000589520 SERPINB13Q9UIV8 391 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 STX8Q9UNK0 236 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 C10orf71Q711Q0 1435 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 BAZ2AQ9UIF9 1905 aaKnown RBP11.92□□□□□ -0.5
VPS25-203ENST00000589520 GOLGA6L19H0YKK7 550 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 NMT2O60551 498 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
VPS25-203ENST00000589520 ADCY5O95622 1261 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 MARCKSP29966 332 aaPredicted RBP11.91□□□□□ -0.5
VPS25-203ENST00000589520 CRKP46108 304 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 MMP14P50281 582 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 TOB1P50616 345 aaPredicted RBP11.91□□□□□ -0.5
VPS25-203ENST00000589520 MSL1Q68DK7 614 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 APOBEC3HQ6NTF7 200 aaKnown RBP11.91□□□□□ -0.5
VPS25-203ENST00000589520 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.91□□□□□ -0.5
VPS25-203ENST00000589520 FOXP4Q8IVH2 680 aaPredicted RBP11.91□□□□□ -0.5
VPS25-203ENST00000589520 CEP57L1Q8IYX8 460 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 CMTR1Q8N1G2 835 aaKnown RBP11.91□□□□□ -0.5
VPS25-203ENST00000589520 CERS5Q8N5B7 392 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 IDI2Q9BXS1 227 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 OSBPL5Q9H0X9 879 aaPredicted RBP11.91□□□□□ -0.5
VPS25-203ENST00000589520 CBX8Q9HC52 389 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 VPS54Q9P1Q0 977 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 MAD2L2Q9UI95 211 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 PCDHA4Q9UN74 947 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 MYH2Q9UKX2 1941 aa11.91□□□□□ -0.5
VPS25-203ENST00000589520 BECN2A8MW95 431 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 ECE2O60344 883 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 PTMAP06454 111 aaKnown RBP11.9□□□□□ -0.5
VPS25-203ENST00000589520 GNA11P29992 359 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 TPM4P67936 248 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 QSER1Q2KHR3 1735 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 CT47A1Q5JQC4 288 aaPredicted RBP11.9□□□□□ -0.5
VPS25-203ENST00000589520 DACT2Q5SW24 774 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 CDC42EP5Q6NZY7 148 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 SHC4Q6S5L8 630 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 TTLL6Q8N841 843 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 TNFRSF25Q93038 417 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 PSMD1Q99460 953 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 FBXO2Q9UK22 296 aaPredicted RBP11.9□□□□□ -0.5
VPS25-203ENST00000589520 KCNH3Q9ULD8 1083 aa11.9□□□□□ -0.5
VPS25-203ENST00000589520 SMTNL1A8MU46 457 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 UBE2Q2LH0YL09 131 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 MYO1BO43795 1136 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 ENTPD3O75355 529 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 NLRP12P59046 1061 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 NR5A1Q13285 461 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 ORC2Q13416 577 aaPredicted RBP11.89□□□□□ -0.51
VPS25-203ENST00000589520 DHX8Q14562 1220 aaKnown RBP11.89□□□□□ -0.51
VPS25-203ENST00000589520 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 CCDC93Q567U6 631 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 ARL6IP4Q66PJ3 421 aaKnown RBP11.89□□□□□ -0.51
VPS25-203ENST00000589520 SARM1Q6SZW1 724 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 SLC51AQ86UW1 340 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 BLIDQ8IZY5 108 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
VPS25-203ENST00000589520 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
VPS25-203ENST00000589520 MTMR4Q9NYA4 1195 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 PI4KBQ9UBF8 816 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 TUBE1Q9UJT0 475 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 NAV1Q8NEY1 1877 aa11.89□□□□□ -0.51
VPS25-203ENST00000589520 IGKV6D-41A0A0C4DH26 115 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 F8W031 263 aaPredicted RBP11.88□□□□□ -0.51
VPS25-203ENST00000589520 LAD1O00515 517 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 TTLL1O95922 423 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 EVX2Q03828 476 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 PICALMQ13492 652 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 TTC38Q5R3I4 469 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 SLC44A5Q8NCS7 719 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 CNNM3Q8NE01 707 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 OXER1Q8TDS5 423 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 CEP95Q96GE4 821 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 DNAJC25Q9H1X3 360 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 DBNDD1Q9H9R9 158 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 C6orf50Q9HD87 102 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 BARHL2Q9NY43 387 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
VPS25-203ENST00000589520 PCDHB6Q9Y5E3 794 aa11.88□□□□□ -0.51
VPS25-203ENST00000589520 ESYT2A0FGR8 921 aa11.87□□□□□ -0.51
VPS25-203ENST00000589520 SNHG28P0DPA3 235 aa11.87□□□□□ -0.51
VPS25-203ENST00000589520 CDC25BP30305 580 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms