RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 RRP15Q9Y3B9 282 aaKnown RBP17.4■□□□□ 0.38
KDM4B-206ENST00000588361 ZNF18P17022 549 aa17.4■□□□□ 0.38
KDM4B-206ENST00000588361 CASQ1P31415 396 aa17.4■□□□□ 0.38
KDM4B-206ENST00000588361 PLEKHA4Q9H4M7 779 aa17.4■□□□□ 0.38
KDM4B-206ENST00000588361 NUP98P52948 1817 aa17.4■□□□□ 0.38
KDM4B-206ENST00000588361 NOP2P46087 812 aaKnown RBP17.39■□□□□ 0.38
KDM4B-206ENST00000588361 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.38
KDM4B-206ENST00000588361 AK7Q96M32 723 aa17.39■□□□□ 0.38
KDM4B-206ENST00000588361 UBXN6Q9BZV1 441 aa17.39■□□□□ 0.38
KDM4B-206ENST00000588361 SUGCTQ9HAC7 445 aa17.39■□□□□ 0.38
KDM4B-206ENST00000588361 ARFGAP3Q9NP61 516 aa17.39■□□□□ 0.38
KDM4B-206ENST00000588361 LRP6O75581 1613 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 EFCAB8A8MWE9 144 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 PLCD1P51178 756 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 NLRP5P59047 1200 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 CTR9Q6PD62 1173 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.37
KDM4B-206ENST00000588361 VPS18Q9P253 973 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 N4BP1O75113 896 aaKnown RBP17.39■□□□□ 0.37
KDM4B-206ENST00000588361 DHX8Q14562 1220 aaKnown RBP17.39■□□□□ 0.37
KDM4B-206ENST00000588361 PHF20Q9BVI0 1012 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 FUT8Q9BYC5 575 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 MINPP1Q9UNW1 487 aa17.39■□□□□ 0.37
KDM4B-206ENST00000588361 ITGB4P16144 1822 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 PHACTR2O75167 634 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 KCNJ6P48051 423 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 RBL2Q08999 1139 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 TROAPQ12815 778 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 TTC38Q5R3I4 469 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 KANK3Q6NY19 840 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 SRLQ86TD4 932 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 SRBD1Q8N5C6 995 aaKnown RBP17.38■□□□□ 0.37
KDM4B-206ENST00000588361 IGSF22Q8N9C0 903 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 RTL9Q8NET4 1388 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 XIRP1Q702N8 1843 aaKnown RBP17.38■□□□□ 0.37
KDM4B-206ENST00000588361 PRDX5P30044 214 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 TBX2Q13207 712 aaPredicted RBP17.38■□□□□ 0.37
KDM4B-206ENST00000588361 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
KDM4B-206ENST00000588361 BRMS1Q9HCU9 246 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 CTNND2Q9UQB3 1225 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 PHLPP2Q6ZVD8 1323 aa17.38■□□□□ 0.37
KDM4B-206ENST00000588361 TFRCP02786 760 aaKnown RBP17.37■□□□□ 0.37
KDM4B-206ENST00000588361 PPP2R3AQ06190 1150 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 NT5DC1Q5TFE4 455 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 SLC51AQ86UW1 340 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 PPFIBP1Q86W92 1011 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 CTCFLQ8NI51 663 aaPredicted RBP17.37■□□□□ 0.37
KDM4B-206ENST00000588361 RASGRP4Q8TDF6 673 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 PLIN2Q99541 437 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 MYH3P11055 1940 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 SYNRGQ9UMZ2 1314 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 FUT2Q10981 343 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 NR1I3Q14994 352 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 RGS22Q8NE09 1264 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 CCDC12Q8WUD4 166 aaPredicted RBP17.37■□□□□ 0.37
KDM4B-206ENST00000588361 MRPL44Q9H9J2 332 aaKnown RBP17.37■□□□□ 0.37
KDM4B-206ENST00000588361 PDE11AQ9HCR9 933 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 STX10O60499 249 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 MECOMQ03112 1051 aa17.37■□□□□ 0.37
KDM4B-206ENST00000588361 GPKOWQ92917 476 aaPredicted RBP eCLIP17.37■□□□□ 0.37
KDM4B-206ENST00000588361 TSPY2A6NKD2 308 aa17.36■□□□□ 0.37
KDM4B-206ENST00000588361 AKR1B15C9JRZ8 316 aaPredicted RBP17.36■□□□□ 0.37
KDM4B-206ENST00000588361 PES1O00541 588 aaKnown RBP17.36■□□□□ 0.37
KDM4B-206ENST00000588361 PRPF3O43395 683 aaKnown RBP17.36■□□□□ 0.37
KDM4B-206ENST00000588361 LONRF2Q1L5Z9 754 aa17.36■□□□□ 0.37
KDM4B-206ENST00000588361 RRAGBQ5VZM2 374 aa17.36■□□□□ 0.37
KDM4B-206ENST00000588361 EEF2KMTQ96G04 330 aa17.36■□□□□ 0.37
KDM4B-206ENST00000588361 VPS16Q9H269 839 aa17.36■□□□□ 0.37
KDM4B-206ENST00000588361 PUF60Q9UHX1 559 aaKnown RBP17.36■□□□□ 0.37
KDM4B-206ENST00000588361 GTF2A1P52655 376 aaPredicted RBP17.36■□□□□ 0.37
KDM4B-206ENST00000588361 DPYDQ12882 1025 aa17.36■□□□□ 0.37
KDM4B-206ENST00000588361 RASSF8Q8NHQ8 419 aa17.36■□□□□ 0.37
KDM4B-206ENST00000588361 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
KDM4B-206ENST00000588361 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
KDM4B-206ENST00000588361 CASP14P31944 242 aa17.35■□□□□ 0.37
KDM4B-206ENST00000588361 SPATA1Q5VX52 437 aa17.35■□□□□ 0.37
KDM4B-206ENST00000588361 TMTC3Q6ZXV5 915 aa17.35■□□□□ 0.37
KDM4B-206ENST00000588361 MCM9Q9NXL9 1143 aa17.35■□□□□ 0.37
KDM4B-206ENST00000588361 COL4A1P02462 1669 aa17.35■□□□□ 0.37
KDM4B-206ENST00000588361 COL1A1P02452 1464 aaPredicted RBP17.35■□□□□ 0.37
KDM4B-206ENST00000588361 CUL4BQ13620 913 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 RAD9BQ6WBX8 426 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 TRIML1Q8N9V2 468 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 DISP2A7MBM2 1401 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 USP17L8P0C7I0 530 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 GOLGA5Q8TBA6 731 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 CWC15Q9P013 229 aaKnown RBP17.34■□□□□ 0.37
KDM4B-206ENST00000588361 DDX60Q8IY21 1712 aaKnown RBP17.34■□□□□ 0.37
KDM4B-206ENST00000588361 LOC102724159A0A0B4J2E5 919 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 A0A1B0GTH6 734 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 ERCC5P28715 1186 aaPredicted RBP17.34■□□□□ 0.37
KDM4B-206ENST00000588361 ACTN2P35609 894 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 UBE4AQ14139 1066 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 PWP2Q15269 919 aaKnown RBP17.34■□□□□ 0.37
KDM4B-206ENST00000588361 TXNRD3Q86VQ6 643 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 GPR161Q8N6U8 529 aaKnown RBP17.34■□□□□ 0.37
KDM4B-206ENST00000588361 NSUN4Q96CB9 384 aaKnown RBP17.34■□□□□ 0.37
KDM4B-206ENST00000588361 SRP68Q9UHB9 627 aaKnown RBP17.34■□□□□ 0.37
KDM4B-206ENST00000588361 ANAPC4Q9UJX5 808 aa17.34■□□□□ 0.37
KDM4B-206ENST00000588361 NPY5RQ15761 445 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms